Gene : Sobic.003G279200 S. bicolor v3.1.1
Defline:  (1 of 2) K03940 - NADH dehydrogenase (ubiquinone) Fe-S protein 7 (NDUFS7) Genomic Order:  2937
Name:  ? Sobic.003G279200 Secondary Identifier:  ? PAC:37918110
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-3781 Sorghum bicolor pathologic  
Sbicolor PWY-4302 Sorghum bicolor pathologic  
Sbicolor PWY-5083 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G279200 0.5kb upstream 0.5kb upstream 3256 true Chr03: 61494504-61497759 Sorghum bicolor
Sobic.003G279200 0.5kb upstream 0.5kb upstream 500 false Chr03: 61497260-61497759 Sorghum bicolor
Sobic.003G279200 0.5kb downstream 0.5kb downstream 3256 true Chr03: 61494004-61497259 Sorghum bicolor
Sobic.003G279200 0.5kb downstream 0.5kb downstream 500 false Chr03: 61494004-61494503 Sorghum bicolor
Sobic.003G279200 1.0kb upstream 1.0kb upstream 3756 true Chr03: 61494504-61498259 Sorghum bicolor
Sobic.003G279200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 61497260-61498259 Sorghum bicolor
Sobic.003G279200 1.0kb downstream 1.0kb downstream 3756 true Chr03: 61493504-61497259 Sorghum bicolor
Sobic.003G279200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 61493504-61494503 Sorghum bicolor
Sobic.003G279200 2.0kb upstream 2.0kb upstream 4756 true Chr03: 61494504-61499259 Sorghum bicolor
Sobic.003G279200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 61497260-61499259 Sorghum bicolor
Sobic.003G279200 2.0kb downstream 2.0kb downstream 4756 true Chr03: 61492504-61497259 Sorghum bicolor
Sobic.003G279200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 61492504-61494503 Sorghum bicolor
Sobic.003G279200 5.0kb upstream 5.0kb upstream 7756 true Chr03: 61494504-61502259 Sorghum bicolor
Sobic.003G279200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 61497260-61502259 Sorghum bicolor
Sobic.003G279200 5.0kb downstream 5.0kb downstream 7756 true Chr03: 61489504-61497259 Sorghum bicolor
Sobic.003G279200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 61489504-61494503 Sorghum bicolor
Sobic.003G279200 10.0kb upstream 10.0kb upstream 12756 true Chr03: 61494504-61507259 Sorghum bicolor
Sobic.003G279200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 61497260-61507259 Sorghum bicolor
Sobic.003G279200 10.0kb downstream 10.0kb downstream 12756 true Chr03: 61484504-61497259 Sorghum bicolor
Sobic.003G279200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 61484504-61494503 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041386 5273 Angiosperm View MSA
122186829 5267 Panicoideae View MSA
124587416 5269 Grass View MSA
121350151 5274 Embryophyte View MSA
123428091 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.951     High High
cufflinks 51.092     High High
cufflinks 28.057     High  
cufflinks 36.992     High  
cufflinks 24.529     High Low
cufflinks 33.759     High  
cufflinks 38.171     High  
cufflinks 41.836     High  
cufflinks 32.871     High  
cufflinks 41.653     High  
cufflinks 29.414     High  
cufflinks 23.037     High Low
cufflinks 28.598     High  
cufflinks 36.134     High  
cufflinks 46.429     High High
cufflinks 43.369     High  
cufflinks 38.488     High  
cufflinks 37.097     High  
cufflinks 24.722     High Low
cufflinks 39.088     High  
cufflinks 16.758     High Low
cufflinks 46.491     High High
cufflinks 29.898     High  
cufflinks 31.801     High  
cufflinks 27.735     High  
cufflinks 46.324     High High
cufflinks 22.536     High Low
cufflinks 53.471     High High
cufflinks 40.228     High  
cufflinks 27.349     High  

0 Strain