Gene : Sobic.003G279500 S. bicolor v3.1.1
Defline:  (1 of 4) 2.3.1.30 - Serine O-acetyltransferase Genomic Order:  2940
Name:  ? Sobic.003G279500 Secondary Identifier:  ? PAC:37914015
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor CYSTSYN-PWY Sorghum bicolor pathologic  
Sbicolor PWY-6936 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G279500 0.5kb upstream 0.5kb upstream 3126 true Chr03: 61508686-61511811 Sorghum bicolor
Sobic.003G279500 0.5kb upstream 0.5kb upstream 500 false Chr03: 61508686-61509185 Sorghum bicolor
Sobic.003G279500 0.5kb downstream 0.5kb downstream 3126 true Chr03: 61509186-61512311 Sorghum bicolor
Sobic.003G279500 0.5kb downstream 0.5kb downstream 500 false Chr03: 61511812-61512311 Sorghum bicolor
Sobic.003G279500 1.0kb upstream 1.0kb upstream 3626 true Chr03: 61508186-61511811 Sorghum bicolor
Sobic.003G279500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 61508186-61509185 Sorghum bicolor
Sobic.003G279500 1.0kb downstream 1.0kb downstream 3626 true Chr03: 61509186-61512811 Sorghum bicolor
Sobic.003G279500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 61511812-61512811 Sorghum bicolor
Sobic.003G279500 2.0kb upstream 2.0kb upstream 4626 true Chr03: 61507186-61511811 Sorghum bicolor
Sobic.003G279500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 61507186-61509185 Sorghum bicolor
Sobic.003G279500 2.0kb downstream 2.0kb downstream 4626 true Chr03: 61509186-61513811 Sorghum bicolor
Sobic.003G279500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 61511812-61513811 Sorghum bicolor
Sobic.003G279500 5.0kb upstream 5.0kb upstream 7626 true Chr03: 61504186-61511811 Sorghum bicolor
Sobic.003G279500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 61504186-61509185 Sorghum bicolor
Sobic.003G279500 5.0kb downstream 5.0kb downstream 7626 true Chr03: 61509186-61516811 Sorghum bicolor
Sobic.003G279500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 61511812-61516811 Sorghum bicolor
Sobic.003G279500 10.0kb upstream 10.0kb upstream 12626 true Chr03: 61499186-61511811 Sorghum bicolor
Sobic.003G279500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 61499186-61509185 Sorghum bicolor
Sobic.003G279500 10.0kb downstream 10.0kb downstream 12626 true Chr03: 61509186-61521811 Sorghum bicolor
Sobic.003G279500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 61511812-61521811 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178876 5267 Panicoideae View MSA
124579116 5269 Grass View MSA
122047158 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.258        
cufflinks 14.615     High High
cufflinks 5.999        
cufflinks 3.028        
cufflinks 5.533        
cufflinks 22.934     High High
cufflinks 8.05        
cufflinks 6.799        
cufflinks 1.449       Low
cufflinks 1.858       Low
cufflinks 3.831        
cufflinks 2.569        
cufflinks 5.188        
cufflinks 3.828        
cufflinks 8.856        
cufflinks 6.219        
cufflinks 5.015        
cufflinks 6.317        
cufflinks 11.318     High High
cufflinks 1.403       Low
cufflinks 0.545       Low
cufflinks 3.091        
cufflinks 3.514        
cufflinks 2.97        
cufflinks 7.168        
cufflinks 10.096     High  
cufflinks 2.233        
cufflinks 9.571        
cufflinks 7.325        
cufflinks 6.323        

0 Strain