Gene : Sobic.003G280600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR21068:SF5 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MIL23-RELATED Genomic Order:  2951
Name:  ? Sobic.003G280600 Secondary Identifier:  ? PAC:37914632
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G280600 0.5kb upstream 0.5kb upstream 2689 true Chr03: 61567269-61569957 Sorghum bicolor
Sobic.003G280600 0.5kb upstream 0.5kb upstream 500 false Chr03: 61567269-61567768 Sorghum bicolor
Sobic.003G280600 0.5kb downstream 0.5kb downstream 2689 true Chr03: 61567769-61570457 Sorghum bicolor
Sobic.003G280600 0.5kb downstream 0.5kb downstream 500 false Chr03: 61569958-61570457 Sorghum bicolor
Sobic.003G280600 1.0kb upstream 1.0kb upstream 3189 true Chr03: 61566769-61569957 Sorghum bicolor
Sobic.003G280600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 61566769-61567768 Sorghum bicolor
Sobic.003G280600 1.0kb downstream 1.0kb downstream 3189 true Chr03: 61567769-61570957 Sorghum bicolor
Sobic.003G280600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 61569958-61570957 Sorghum bicolor
Sobic.003G280600 2.0kb upstream 2.0kb upstream 4189 true Chr03: 61565769-61569957 Sorghum bicolor
Sobic.003G280600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 61565769-61567768 Sorghum bicolor
Sobic.003G280600 2.0kb downstream 2.0kb downstream 4189 true Chr03: 61567769-61571957 Sorghum bicolor
Sobic.003G280600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 61569958-61571957 Sorghum bicolor
Sobic.003G280600 5.0kb upstream 5.0kb upstream 7189 true Chr03: 61562769-61569957 Sorghum bicolor
Sobic.003G280600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 61562769-61567768 Sorghum bicolor
Sobic.003G280600 5.0kb downstream 5.0kb downstream 7189 true Chr03: 61567769-61574957 Sorghum bicolor
Sobic.003G280600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 61569958-61574957 Sorghum bicolor
Sobic.003G280600 10.0kb upstream 10.0kb upstream 12189 true Chr03: 61557769-61569957 Sorghum bicolor
Sobic.003G280600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 61557769-61567768 Sorghum bicolor
Sobic.003G280600 10.0kb downstream 10.0kb downstream 12189 true Chr03: 61567769-61579957 Sorghum bicolor
Sobic.003G280600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 61569958-61579957 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026413 5273 Angiosperm View MSA
122180102 5267 Panicoideae View MSA
124581054 5269 Grass View MSA
121296318 5274 Embryophyte View MSA
123334500 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.212       Low
cufflinks 0.394        
cufflinks 0.258       Low
cufflinks 0.981        
cufflinks 0.713        
cufflinks 1.653        
cufflinks 0.873        
cufflinks 0.916        
cufflinks 2.122       High
cufflinks 7.393       High
cufflinks 0.889        
cufflinks 0.903        
cufflinks 3.928       High
cufflinks 0.668        
cufflinks 1.372        
cufflinks 0.57        
cufflinks 0.668        
cufflinks 0.681        
cufflinks 0.528        
cufflinks 0.612        
cufflinks 0.096     Low Low
cufflinks 0.585        
cufflinks 0.598        
cufflinks 0.647        
cufflinks 0.482        
cufflinks 0.747        
cufflinks 0.244       Low
cufflinks 0.031     Low Low
cufflinks 0.745        
cufflinks 0.753        

0 Strain