Gene : Sobic.003G224000 S. bicolor v3.1.1
Genomic Order:  2352 Name:  ? Sobic.003G224000
Secondary Identifier:  ? PAC:37913901
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G224000 0.5kb upstream 0.5kb upstream 947 true Chr03: 56006005-56006951 Sorghum bicolor
Sobic.003G224000 0.5kb upstream 0.5kb upstream 500 false Chr03: 56006005-56006504 Sorghum bicolor
Sobic.003G224000 0.5kb downstream 0.5kb downstream 947 true Chr03: 56006505-56007451 Sorghum bicolor
Sobic.003G224000 0.5kb downstream 0.5kb downstream 500 false Chr03: 56006952-56007451 Sorghum bicolor
Sobic.003G224000 1.0kb upstream 1.0kb upstream 1447 true Chr03: 56005505-56006951 Sorghum bicolor
Sobic.003G224000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 56005505-56006504 Sorghum bicolor
Sobic.003G224000 1.0kb downstream 1.0kb downstream 1447 true Chr03: 56006505-56007951 Sorghum bicolor
Sobic.003G224000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 56006952-56007951 Sorghum bicolor
Sobic.003G224000 2.0kb upstream 2.0kb upstream 2447 true Chr03: 56004505-56006951 Sorghum bicolor
Sobic.003G224000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 56004505-56006504 Sorghum bicolor
Sobic.003G224000 2.0kb downstream 2.0kb downstream 2447 true Chr03: 56006505-56008951 Sorghum bicolor
Sobic.003G224000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 56006952-56008951 Sorghum bicolor
Sobic.003G224000 5.0kb upstream 5.0kb upstream 5447 true Chr03: 56001505-56006951 Sorghum bicolor
Sobic.003G224000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 56001505-56006504 Sorghum bicolor
Sobic.003G224000 5.0kb downstream 5.0kb downstream 5447 true Chr03: 56006505-56011951 Sorghum bicolor
Sobic.003G224000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 56006952-56011951 Sorghum bicolor
Sobic.003G224000 10.0kb upstream 10.0kb upstream 10447 true Chr03: 55996505-56006951 Sorghum bicolor
Sobic.003G224000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 55996505-56006504 Sorghum bicolor
Sobic.003G224000 10.0kb downstream 10.0kb downstream 10447 true Chr03: 56006505-56016951 Sorghum bicolor
Sobic.003G224000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 56006952-56016951 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029230 5273 Angiosperm View MSA
122183922 5267 Panicoideae View MSA
124581303 5269 Grass View MSA
121298592 5274 Embryophyte View MSA
123336555 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.217        
cufflinks 0.077       Low
cufflinks 0.163        
cufflinks 0.353        
cufflinks 0.487       High
cufflinks 0.092     Low Low
cufflinks 0.275        
cufflinks 0.042     Low Low
cufflinks 0.191        
cufflinks 0.564       High
cufflinks 0.075     Low Low
cufflinks 0.368        
cufflinks 0.209        
cufflinks 0.199        
cufflinks 0.451       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.417        
cufflinks 0.289        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.255        
cufflinks 0.109       Low
cufflinks 0.411        
cufflinks 0.433        
cufflinks 0.221        
cufflinks 0.064       Low
cufflinks 0.049       Low
cufflinks 0.505       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.399        
cufflinks 0.199        

0 Strain