Gene : Sobic.003G226400 S. bicolor v3.1.1
Defline:  (1 of 61) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  2374
Name:  ? Sobic.003G226400 Secondary Identifier:  ? PAC:37916583
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G226400 0.5kb upstream 0.5kb upstream 1220 true Chr03: 56281888-56283107 Sorghum bicolor
Sobic.003G226400 0.5kb upstream 0.5kb upstream 500 false Chr03: 56281888-56282387 Sorghum bicolor
Sobic.003G226400 0.5kb downstream 0.5kb downstream 1220 true Chr03: 56282388-56283607 Sorghum bicolor
Sobic.003G226400 0.5kb downstream 0.5kb downstream 500 false Chr03: 56283108-56283607 Sorghum bicolor
Sobic.003G226400 1.0kb upstream 1.0kb upstream 1720 true Chr03: 56281388-56283107 Sorghum bicolor
Sobic.003G226400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 56281388-56282387 Sorghum bicolor
Sobic.003G226400 1.0kb downstream 1.0kb downstream 1720 true Chr03: 56282388-56284107 Sorghum bicolor
Sobic.003G226400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 56283108-56284107 Sorghum bicolor
Sobic.003G226400 2.0kb upstream 2.0kb upstream 2720 true Chr03: 56280388-56283107 Sorghum bicolor
Sobic.003G226400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 56280388-56282387 Sorghum bicolor
Sobic.003G226400 2.0kb downstream 2.0kb downstream 2720 true Chr03: 56282388-56285107 Sorghum bicolor
Sobic.003G226400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 56283108-56285107 Sorghum bicolor
Sobic.003G226400 5.0kb upstream 5.0kb upstream 5720 true Chr03: 56277388-56283107 Sorghum bicolor
Sobic.003G226400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 56277388-56282387 Sorghum bicolor
Sobic.003G226400 5.0kb downstream 5.0kb downstream 5720 true Chr03: 56282388-56288107 Sorghum bicolor
Sobic.003G226400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 56283108-56288107 Sorghum bicolor
Sobic.003G226400 10.0kb upstream 10.0kb upstream 10720 true Chr03: 56272388-56283107 Sorghum bicolor
Sobic.003G226400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 56272388-56282387 Sorghum bicolor
Sobic.003G226400 10.0kb downstream 10.0kb downstream 10720 true Chr03: 56282388-56293107 Sorghum bicolor
Sobic.003G226400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 56283108-56293107 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188637 5267 Panicoideae View MSA
124574530 5269 Grass View MSA
122043658 5273 Angiosperm View MSA
121348077 5274 Embryophyte View MSA
123380721 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.64        
cufflinks 0.203        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 16.243     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.976        

0 Strain