Gene : Sobic.003G227100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11134//PTHR11134:SF4 - ADAPTER-RELATED PROTEIN COMPLEX, BETA SUBUNIT // AP-4 COMPLEX SUBUNIT BETA-1 Genomic Order:  2382
Name:  ? Sobic.003G227100 Secondary Identifier:  ? PAC:37912605
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G227100 0.5kb upstream 0.5kb upstream 13943 true Chr03: 56431941-56445883 Sorghum bicolor
Sobic.003G227100 0.5kb upstream 0.5kb upstream 500 false Chr03: 56431941-56432440 Sorghum bicolor
Sobic.003G227100 0.5kb downstream 0.5kb downstream 13943 true Chr03: 56432441-56446383 Sorghum bicolor
Sobic.003G227100 0.5kb downstream 0.5kb downstream 500 false Chr03: 56445884-56446383 Sorghum bicolor
Sobic.003G227100 1.0kb upstream 1.0kb upstream 14443 true Chr03: 56431441-56445883 Sorghum bicolor
Sobic.003G227100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 56431441-56432440 Sorghum bicolor
Sobic.003G227100 1.0kb downstream 1.0kb downstream 14443 true Chr03: 56432441-56446883 Sorghum bicolor
Sobic.003G227100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 56445884-56446883 Sorghum bicolor
Sobic.003G227100 2.0kb upstream 2.0kb upstream 15443 true Chr03: 56430441-56445883 Sorghum bicolor
Sobic.003G227100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 56430441-56432440 Sorghum bicolor
Sobic.003G227100 2.0kb downstream 2.0kb downstream 15443 true Chr03: 56432441-56447883 Sorghum bicolor
Sobic.003G227100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 56445884-56447883 Sorghum bicolor
Sobic.003G227100 5.0kb upstream 5.0kb upstream 18443 true Chr03: 56427441-56445883 Sorghum bicolor
Sobic.003G227100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 56427441-56432440 Sorghum bicolor
Sobic.003G227100 5.0kb downstream 5.0kb downstream 18443 true Chr03: 56432441-56450883 Sorghum bicolor
Sobic.003G227100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 56445884-56450883 Sorghum bicolor
Sobic.003G227100 10.0kb upstream 10.0kb upstream 23443 true Chr03: 56422441-56445883 Sorghum bicolor
Sobic.003G227100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 56422441-56432440 Sorghum bicolor
Sobic.003G227100 10.0kb downstream 10.0kb downstream 23443 true Chr03: 56432441-56455883 Sorghum bicolor
Sobic.003G227100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 56445884-56455883 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040917 5273 Angiosperm View MSA
122195807 5267 Panicoideae View MSA
124586045 5269 Grass View MSA
121346542 5274 Embryophyte View MSA
123428647 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.102        
cufflinks 1.033       Low
cufflinks 2.439       Low
cufflinks 3.279        
cufflinks 8.228        
cufflinks 3.466        
cufflinks 5.376        
cufflinks 2.676       Low
cufflinks 9.099        
cufflinks 8.312        
cufflinks 7.246        
cufflinks 7.81        
cufflinks 6.905        
cufflinks 7.421        
cufflinks 6.594        
cufflinks 2.134       Low
cufflinks 5.51        
cufflinks 5.413        
cufflinks 3.053        
cufflinks 7.363        
cufflinks 6.346        
cufflinks 8.88        
cufflinks 8.346        
cufflinks 8.453        
cufflinks 2.191       Low
cufflinks 1.328       Low
cufflinks 6.277        
cufflinks 3.3        
cufflinks 4.702        
cufflinks 7.73        

0 Strain