Gene : Sobic.003G234701 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11062//PTHR11062:SF75 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // SUBFAMILY NOT NAMED Genomic Order:  2462
Name:  ? Sobic.003G234701 Secondary Identifier:  ? PAC:37915266
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-5980 Sorghum bicolor pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G234701 0.5kb upstream 0.5kb upstream 2653 true Chr03: 57333516-57336168 Sorghum bicolor
Sobic.003G234701 0.5kb upstream 0.5kb upstream 500 false Chr03: 57333516-57334015 Sorghum bicolor
Sobic.003G234701 0.5kb downstream 0.5kb downstream 2653 true Chr03: 57334016-57336668 Sorghum bicolor
Sobic.003G234701 0.5kb downstream 0.5kb downstream 500 false Chr03: 57336169-57336668 Sorghum bicolor
Sobic.003G234701 1.0kb upstream 1.0kb upstream 3153 true Chr03: 57333016-57336168 Sorghum bicolor
Sobic.003G234701 1.0kb upstream 1.0kb upstream 1000 false Chr03: 57333016-57334015 Sorghum bicolor
Sobic.003G234701 1.0kb downstream 1.0kb downstream 3153 true Chr03: 57334016-57337168 Sorghum bicolor
Sobic.003G234701 1.0kb downstream 1.0kb downstream 1000 false Chr03: 57336169-57337168 Sorghum bicolor
Sobic.003G234701 2.0kb upstream 2.0kb upstream 4153 true Chr03: 57332016-57336168 Sorghum bicolor
Sobic.003G234701 2.0kb upstream 2.0kb upstream 2000 false Chr03: 57332016-57334015 Sorghum bicolor
Sobic.003G234701 2.0kb downstream 2.0kb downstream 4153 true Chr03: 57334016-57338168 Sorghum bicolor
Sobic.003G234701 2.0kb downstream 2.0kb downstream 2000 false Chr03: 57336169-57338168 Sorghum bicolor
Sobic.003G234701 5.0kb upstream 5.0kb upstream 7153 true Chr03: 57329016-57336168 Sorghum bicolor
Sobic.003G234701 5.0kb upstream 5.0kb upstream 5000 false Chr03: 57329016-57334015 Sorghum bicolor
Sobic.003G234701 5.0kb downstream 5.0kb downstream 7153 true Chr03: 57334016-57341168 Sorghum bicolor
Sobic.003G234701 5.0kb downstream 5.0kb downstream 5000 false Chr03: 57336169-57341168 Sorghum bicolor
Sobic.003G234701 10.0kb upstream 10.0kb upstream 12153 true Chr03: 57324016-57336168 Sorghum bicolor
Sobic.003G234701 10.0kb upstream 10.0kb upstream 10000 false Chr03: 57324016-57334015 Sorghum bicolor
Sobic.003G234701 10.0kb downstream 10.0kb downstream 12153 true Chr03: 57334016-57346168 Sorghum bicolor
Sobic.003G234701 10.0kb downstream 10.0kb downstream 10000 false Chr03: 57336169-57346168 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198769 5267 Panicoideae View MSA
124573490 5269 Grass View MSA
122046187 5273 Angiosperm View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.044     Low  
cufflinks 0.136        
cufflinks 0.07        
cufflinks 0.126        
cufflinks 0.007     Low Low
cufflinks 0.094     Low  
cufflinks 0.021     Low  
cufflinks 0.061     Low  
cufflinks 0.242       High
cufflinks 0.184       High
cufflinks 0.095        
cufflinks 0.041     Low  
cufflinks 0.159       High
cufflinks 0.041     Low  
cufflinks 1.189       High
cufflinks 0.015     Low  
cufflinks 0.025     Low  
cufflinks 0.016     Low  
cufflinks 0.035     Low  
cufflinks 0.044     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.021     Low  
cufflinks 0.014     Low  
cufflinks 0.069        
cufflinks 0.192       High
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.135        

0 Strain