Gene : Sobic.003G239500 S. bicolor v3.1.1
Defline:  (1 of 28) 3.1.1.32 - Phospholipase A(1) / Phospholipase A1 Genomic Order:  2515
Name:  ? Sobic.003G239500 Secondary Identifier:  ? PAC:37915560
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor LIPASYN-PWY Sorghum bicolor pathologic  
Sbicolor PWY-6803 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G239500 0.5kb upstream 0.5kb upstream 3191 true Chr03: 57892392-57895582 Sorghum bicolor
Sobic.003G239500 0.5kb upstream 0.5kb upstream 500 false Chr03: 57892392-57892891 Sorghum bicolor
Sobic.003G239500 0.5kb downstream 0.5kb downstream 3191 true Chr03: 57892892-57896082 Sorghum bicolor
Sobic.003G239500 0.5kb downstream 0.5kb downstream 500 false Chr03: 57895583-57896082 Sorghum bicolor
Sobic.003G239500 1.0kb upstream 1.0kb upstream 3691 true Chr03: 57891892-57895582 Sorghum bicolor
Sobic.003G239500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 57891892-57892891 Sorghum bicolor
Sobic.003G239500 1.0kb downstream 1.0kb downstream 3691 true Chr03: 57892892-57896582 Sorghum bicolor
Sobic.003G239500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 57895583-57896582 Sorghum bicolor
Sobic.003G239500 2.0kb upstream 2.0kb upstream 4691 true Chr03: 57890892-57895582 Sorghum bicolor
Sobic.003G239500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 57890892-57892891 Sorghum bicolor
Sobic.003G239500 2.0kb downstream 2.0kb downstream 4691 true Chr03: 57892892-57897582 Sorghum bicolor
Sobic.003G239500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 57895583-57897582 Sorghum bicolor
Sobic.003G239500 5.0kb upstream 5.0kb upstream 7691 true Chr03: 57887892-57895582 Sorghum bicolor
Sobic.003G239500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 57887892-57892891 Sorghum bicolor
Sobic.003G239500 5.0kb downstream 5.0kb downstream 7691 true Chr03: 57892892-57900582 Sorghum bicolor
Sobic.003G239500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 57895583-57900582 Sorghum bicolor
Sobic.003G239500 10.0kb upstream 10.0kb upstream 12691 true Chr03: 57882892-57895582 Sorghum bicolor
Sobic.003G239500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 57882892-57892891 Sorghum bicolor
Sobic.003G239500 10.0kb downstream 10.0kb downstream 12691 true Chr03: 57892892-57905582 Sorghum bicolor
Sobic.003G239500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 57895583-57905582 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026801 5273 Angiosperm View MSA
122190063 5267 Panicoideae View MSA
124570182 5269 Grass View MSA
121296567 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.129       High
cufflinks 0.022     Low Low
cufflinks 0.651        
cufflinks 0.816        
cufflinks 0.239        
cufflinks 2.657       High
cufflinks 0.146        
cufflinks 0.127        
cufflinks 0.303        
cufflinks 0.548        
cufflinks 0.098        
cufflinks 0.186        
cufflinks 0.187        
cufflinks 1.206       High
cufflinks 0.146        
cufflinks 0.219        
cufflinks 0.133        
cufflinks 0.138        
cufflinks 0.746        
cufflinks 0.187        
cufflinks 0.098     Low  
cufflinks 0.543        
cufflinks 0.118        
cufflinks 0.187        
cufflinks 0.232        
cufflinks 0.026     Low Low
cufflinks 0.146        
cufflinks 0.482        
cufflinks 0.157        
cufflinks 0.659        

0 Strain