Gene : Sobic.003G270600 S. bicolor v3.1.1
Defline:  (1 of 1) K12393 - AP-1 complex subunit mu (AP1M) Genomic Order:  2845
Name:  ? Sobic.003G270600 Secondary Identifier:  ? PAC:37914799
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G270600 0.5kb upstream 0.5kb upstream 8631 true Chr03: 60726643-60735273 Sorghum bicolor
Sobic.003G270600 0.5kb upstream 0.5kb upstream 500 false Chr03: 60726643-60727142 Sorghum bicolor
Sobic.003G270600 0.5kb downstream 0.5kb downstream 8631 true Chr03: 60727143-60735773 Sorghum bicolor
Sobic.003G270600 0.5kb downstream 0.5kb downstream 500 false Chr03: 60735274-60735773 Sorghum bicolor
Sobic.003G270600 1.0kb upstream 1.0kb upstream 9131 true Chr03: 60726143-60735273 Sorghum bicolor
Sobic.003G270600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 60726143-60727142 Sorghum bicolor
Sobic.003G270600 1.0kb downstream 1.0kb downstream 9131 true Chr03: 60727143-60736273 Sorghum bicolor
Sobic.003G270600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 60735274-60736273 Sorghum bicolor
Sobic.003G270600 2.0kb upstream 2.0kb upstream 10131 true Chr03: 60725143-60735273 Sorghum bicolor
Sobic.003G270600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 60725143-60727142 Sorghum bicolor
Sobic.003G270600 2.0kb downstream 2.0kb downstream 10131 true Chr03: 60727143-60737273 Sorghum bicolor
Sobic.003G270600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 60735274-60737273 Sorghum bicolor
Sobic.003G270600 5.0kb upstream 5.0kb upstream 13131 true Chr03: 60722143-60735273 Sorghum bicolor
Sobic.003G270600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 60722143-60727142 Sorghum bicolor
Sobic.003G270600 5.0kb downstream 5.0kb downstream 13131 true Chr03: 60727143-60740273 Sorghum bicolor
Sobic.003G270600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 60735274-60740273 Sorghum bicolor
Sobic.003G270600 10.0kb upstream 10.0kb upstream 18131 true Chr03: 60717143-60735273 Sorghum bicolor
Sobic.003G270600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 60717143-60727142 Sorghum bicolor
Sobic.003G270600 10.0kb downstream 10.0kb downstream 18131 true Chr03: 60727143-60745273 Sorghum bicolor
Sobic.003G270600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 60735274-60745273 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181016 5267 Panicoideae View MSA
124573243 5269 Grass View MSA
122042321 5273 Angiosperm View MSA
121351396 5274 Embryophyte View MSA
123428377 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.375     High  
cufflinks 4.197       Low
cufflinks 13.249     High  
cufflinks 17.388     High  
cufflinks 28.048     High  
cufflinks 18.14     High  
cufflinks 20.226     High  
cufflinks 9.483     High Low
cufflinks 25.296     High  
cufflinks 24.301     High  
cufflinks 24.264     High  
cufflinks 26.764     High  
cufflinks 26.366     High  
cufflinks 27.028     High  
cufflinks 17.987     High  
cufflinks 10.537     High Low
cufflinks 23.52     High  
cufflinks 24.081     High  
cufflinks 11.65     High Low
cufflinks 27.87     High  
cufflinks 20.469     High  
cufflinks 32.659     High  
cufflinks 31.444     High  
cufflinks 30.742     High  
cufflinks 7.285       Low
cufflinks 3.951       Low
cufflinks 20.795     High  
cufflinks 10.298     High Low
cufflinks 24.15     High  
cufflinks 16.904     High  

0 Strain