Gene : Sobic.003G314100 S. bicolor v3.1.1
Defline:  (1 of 2) KOG2659 - LisH motif-containing protein Genomic Order:  3306
Name:  ? Sobic.003G314100 Secondary Identifier:  ? PAC:37915243
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G314100 0.5kb upstream 0.5kb upstream 6482 true Chr03: 64230908-64237389 Sorghum bicolor
Sobic.003G314100 0.5kb upstream 0.5kb upstream 500 false Chr03: 64236890-64237389 Sorghum bicolor
Sobic.003G314100 0.5kb downstream 0.5kb downstream 6482 true Chr03: 64230408-64236889 Sorghum bicolor
Sobic.003G314100 0.5kb downstream 0.5kb downstream 500 false Chr03: 64230408-64230907 Sorghum bicolor
Sobic.003G314100 1.0kb upstream 1.0kb upstream 6982 true Chr03: 64230908-64237889 Sorghum bicolor
Sobic.003G314100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 64236890-64237889 Sorghum bicolor
Sobic.003G314100 1.0kb downstream 1.0kb downstream 6982 true Chr03: 64229908-64236889 Sorghum bicolor
Sobic.003G314100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 64229908-64230907 Sorghum bicolor
Sobic.003G314100 2.0kb upstream 2.0kb upstream 7982 true Chr03: 64230908-64238889 Sorghum bicolor
Sobic.003G314100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 64236890-64238889 Sorghum bicolor
Sobic.003G314100 2.0kb downstream 2.0kb downstream 7982 true Chr03: 64228908-64236889 Sorghum bicolor
Sobic.003G314100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 64228908-64230907 Sorghum bicolor
Sobic.003G314100 5.0kb upstream 5.0kb upstream 10982 true Chr03: 64230908-64241889 Sorghum bicolor
Sobic.003G314100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 64236890-64241889 Sorghum bicolor
Sobic.003G314100 5.0kb downstream 5.0kb downstream 10982 true Chr03: 64225908-64236889 Sorghum bicolor
Sobic.003G314100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 64225908-64230907 Sorghum bicolor
Sobic.003G314100 10.0kb upstream 10.0kb upstream 15982 true Chr03: 64230908-64246889 Sorghum bicolor
Sobic.003G314100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 64236890-64246889 Sorghum bicolor
Sobic.003G314100 10.0kb downstream 10.0kb downstream 15982 true Chr03: 64220908-64236889 Sorghum bicolor
Sobic.003G314100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 64220908-64230907 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187916 5267 Panicoideae View MSA
124579354 5269 Grass View MSA
122047349 5273 Angiosperm View MSA
121347103 5274 Embryophyte View MSA
123424554 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.833       High
cufflinks 5.665        
cufflinks 6.017        
cufflinks 7.556       High
cufflinks 3.465       Low
cufflinks 7.649       High
cufflinks 5.198        
cufflinks 5.343        
cufflinks 6.654        
cufflinks 7.986       High
cufflinks 5.159        
cufflinks 5.682        
cufflinks 6.328        
cufflinks 6.026        
cufflinks 5.818        
cufflinks 6.479        
cufflinks 5.607        
cufflinks 5.851        
cufflinks 4.245       Low
cufflinks 7.168       High
cufflinks 4.717        
cufflinks 5.112        
cufflinks 5.705        
cufflinks 5.758        
cufflinks 5.889        
cufflinks 5.044        
cufflinks 5.673        
cufflinks 8.526       High
cufflinks 5.496        
cufflinks 5.282        

0 Strain