Gene : Sobic.003G317100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR34053//PTHR34053:SF1 - FAMILY NOT NAMED // PROTEIN ULTRAPETALA 1-RELATED Genomic Order:  3336
Name:  ? Sobic.003G317100 Secondary Identifier:  ? PAC:37918145
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G317100 0.5kb upstream 0.5kb upstream 7163 true Chr03: 64477009-64484171 Sorghum bicolor
Sobic.003G317100 0.5kb upstream 0.5kb upstream 500 false Chr03: 64483672-64484171 Sorghum bicolor
Sobic.003G317100 0.5kb downstream 0.5kb downstream 7163 true Chr03: 64476509-64483671 Sorghum bicolor
Sobic.003G317100 0.5kb downstream 0.5kb downstream 500 false Chr03: 64476509-64477008 Sorghum bicolor
Sobic.003G317100 1.0kb upstream 1.0kb upstream 7663 true Chr03: 64477009-64484671 Sorghum bicolor
Sobic.003G317100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 64483672-64484671 Sorghum bicolor
Sobic.003G317100 1.0kb downstream 1.0kb downstream 7663 true Chr03: 64476009-64483671 Sorghum bicolor
Sobic.003G317100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 64476009-64477008 Sorghum bicolor
Sobic.003G317100 2.0kb upstream 2.0kb upstream 8663 true Chr03: 64477009-64485671 Sorghum bicolor
Sobic.003G317100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 64483672-64485671 Sorghum bicolor
Sobic.003G317100 2.0kb downstream 2.0kb downstream 8663 true Chr03: 64475009-64483671 Sorghum bicolor
Sobic.003G317100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 64475009-64477008 Sorghum bicolor
Sobic.003G317100 5.0kb upstream 5.0kb upstream 11663 true Chr03: 64477009-64488671 Sorghum bicolor
Sobic.003G317100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 64483672-64488671 Sorghum bicolor
Sobic.003G317100 5.0kb downstream 5.0kb downstream 11663 true Chr03: 64472009-64483671 Sorghum bicolor
Sobic.003G317100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 64472009-64477008 Sorghum bicolor
Sobic.003G317100 10.0kb upstream 10.0kb upstream 16663 true Chr03: 64477009-64493671 Sorghum bicolor
Sobic.003G317100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 64483672-64493671 Sorghum bicolor
Sobic.003G317100 10.0kb downstream 10.0kb downstream 16663 true Chr03: 64467009-64483671 Sorghum bicolor
Sobic.003G317100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 64467009-64477008 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187231 5267 Panicoideae View MSA
124571679 5269 Grass View MSA
122043441 5273 Angiosperm View MSA
121310126 5274 Embryophyte View MSA
123347700 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.597       High
cufflinks 0.355        
cufflinks 0.526        
cufflinks 0.121       Low
cufflinks 0.216        
cufflinks 0.057     Low Low
cufflinks 0.329        
cufflinks 0.323        
cufflinks 0.119       Low
cufflinks 0.148       Low
cufflinks 0.624        
cufflinks 0.757        
cufflinks 0.52        
cufflinks 0.566        
cufflinks 0.57        
cufflinks 0.197        
cufflinks 0.287        
cufflinks 0.274        
cufflinks 0.751        
cufflinks 0.234        
cufflinks 0.53        
cufflinks 0.582        
cufflinks 0.568        
cufflinks 0.646        
cufflinks 0.388        
cufflinks 0.318        
cufflinks 0.727        
cufflinks 0.143       Low
cufflinks 0.652        
cufflinks 0.629        

0 Strain