Gene : Sobic.003G317600 S. bicolor v3.1.1
Defline:  (1 of 5) K17871 - NADH:ubiquinone reductase (non-electrogenic) (ndh1) Genomic Order:  3341
Name:  ? Sobic.003G317600 Secondary Identifier:  ? PAC:37914355
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-7279 Sorghum bicolor pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G317600 0.5kb upstream 0.5kb upstream 7180 true Chr03: 64522316-64529495 Sorghum bicolor
Sobic.003G317600 0.5kb upstream 0.5kb upstream 500 false Chr03: 64522316-64522815 Sorghum bicolor
Sobic.003G317600 0.5kb downstream 0.5kb downstream 7180 true Chr03: 64522816-64529995 Sorghum bicolor
Sobic.003G317600 0.5kb downstream 0.5kb downstream 500 false Chr03: 64529496-64529995 Sorghum bicolor
Sobic.003G317600 1.0kb upstream 1.0kb upstream 7680 true Chr03: 64521816-64529495 Sorghum bicolor
Sobic.003G317600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 64521816-64522815 Sorghum bicolor
Sobic.003G317600 1.0kb downstream 1.0kb downstream 7680 true Chr03: 64522816-64530495 Sorghum bicolor
Sobic.003G317600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 64529496-64530495 Sorghum bicolor
Sobic.003G317600 2.0kb upstream 2.0kb upstream 8680 true Chr03: 64520816-64529495 Sorghum bicolor
Sobic.003G317600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 64520816-64522815 Sorghum bicolor
Sobic.003G317600 2.0kb downstream 2.0kb downstream 8680 true Chr03: 64522816-64531495 Sorghum bicolor
Sobic.003G317600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 64529496-64531495 Sorghum bicolor
Sobic.003G317600 5.0kb upstream 5.0kb upstream 11680 true Chr03: 64517816-64529495 Sorghum bicolor
Sobic.003G317600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 64517816-64522815 Sorghum bicolor
Sobic.003G317600 5.0kb downstream 5.0kb downstream 11680 true Chr03: 64522816-64534495 Sorghum bicolor
Sobic.003G317600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 64529496-64534495 Sorghum bicolor
Sobic.003G317600 10.0kb upstream 10.0kb upstream 16680 true Chr03: 64512816-64529495 Sorghum bicolor
Sobic.003G317600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 64512816-64522815 Sorghum bicolor
Sobic.003G317600 10.0kb downstream 10.0kb downstream 16680 true Chr03: 64522816-64539495 Sorghum bicolor
Sobic.003G317600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 64529496-64539495 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179937 5267 Panicoideae View MSA
124586360 5269 Grass View MSA
122046891 5273 Angiosperm View MSA
121348097 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.071     Low High
cufflinks 0.007     Low  
cufflinks 0.098       High
cufflinks 0.008     Low  
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.005     Low  
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.006     Low  
cufflinks 0.002     Low Low
cufflinks 0.014     Low  
cufflinks 7.97       High
cufflinks 0.021     Low  
cufflinks 0.036     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.023     Low  
cufflinks 0.004     Low  
cufflinks 0.022     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.02     Low  
cufflinks 0.002     Low Low
cufflinks 0.221       High

0 Strain