Gene : Sobic.003G324000 S. bicolor v3.1.1
Defline:  (1 of 1) 1.1.1.157 - 3-hydroxybutyryl-CoA dehydrogenase / BHBD Genomic Order:  3411
Name:  ? Sobic.003G324000 Secondary Identifier:  ? PAC:37917351
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G324000 0.5kb upstream 0.5kb upstream 2694 true Chr03: 65054369-65057062 Sorghum bicolor
Sobic.003G324000 0.5kb upstream 0.5kb upstream 500 false Chr03: 65054369-65054868 Sorghum bicolor
Sobic.003G324000 0.5kb downstream 0.5kb downstream 2694 true Chr03: 65054869-65057562 Sorghum bicolor
Sobic.003G324000 0.5kb downstream 0.5kb downstream 500 false Chr03: 65057063-65057562 Sorghum bicolor
Sobic.003G324000 1.0kb upstream 1.0kb upstream 3194 true Chr03: 65053869-65057062 Sorghum bicolor
Sobic.003G324000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 65053869-65054868 Sorghum bicolor
Sobic.003G324000 1.0kb downstream 1.0kb downstream 3194 true Chr03: 65054869-65058062 Sorghum bicolor
Sobic.003G324000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 65057063-65058062 Sorghum bicolor
Sobic.003G324000 2.0kb upstream 2.0kb upstream 4194 true Chr03: 65052869-65057062 Sorghum bicolor
Sobic.003G324000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 65052869-65054868 Sorghum bicolor
Sobic.003G324000 2.0kb downstream 2.0kb downstream 4194 true Chr03: 65054869-65059062 Sorghum bicolor
Sobic.003G324000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 65057063-65059062 Sorghum bicolor
Sobic.003G324000 5.0kb upstream 5.0kb upstream 7194 true Chr03: 65049869-65057062 Sorghum bicolor
Sobic.003G324000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 65049869-65054868 Sorghum bicolor
Sobic.003G324000 5.0kb downstream 5.0kb downstream 7194 true Chr03: 65054869-65062062 Sorghum bicolor
Sobic.003G324000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 65057063-65062062 Sorghum bicolor
Sobic.003G324000 10.0kb upstream 10.0kb upstream 12194 true Chr03: 65044869-65057062 Sorghum bicolor
Sobic.003G324000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 65044869-65054868 Sorghum bicolor
Sobic.003G324000 10.0kb downstream 10.0kb downstream 12194 true Chr03: 65054869-65067062 Sorghum bicolor
Sobic.003G324000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 65057063-65067062 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175719 5267 Panicoideae View MSA
124570909 5269 Grass View MSA
122042750 5273 Angiosperm View MSA
121344136 5274 Embryophyte View MSA
123426191 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.4        
cufflinks 9.609     High  
cufflinks 7.276        
cufflinks 14.821     High  
cufflinks 9.982        
cufflinks 6.095        
cufflinks 3.723        
cufflinks 9.468     High  
cufflinks 11.014        
cufflinks 10.076        
cufflinks 9.46        
cufflinks 6.78        
cufflinks 3.155       Low
cufflinks 9.808        
cufflinks 9.651        
cufflinks 37.509     High High
cufflinks 5.078        
cufflinks 4.242        
cufflinks 18.867     High High
cufflinks 7.507        
cufflinks 13.845        
cufflinks 9.101        
cufflinks 3.873        
cufflinks 3.94        
cufflinks 9.417     High  
cufflinks 15.735     High  
cufflinks 16.852     High  
cufflinks 267.429     High High
cufflinks 7.166        
cufflinks 9.109        

0 Strain