Gene : Sobic.003G328500 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR10177//PTHR10177:SF241 - CYCLINE // SUBFAMILY NOT NAMED Genomic Order:  3457
Name:  ? Sobic.003G328500 Secondary Identifier:  ? PAC:37914825
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G328500 0.5kb upstream 0.5kb upstream 3382 true Chr03: 65389712-65393093 Sorghum bicolor
Sobic.003G328500 0.5kb upstream 0.5kb upstream 500 false Chr03: 65392594-65393093 Sorghum bicolor
Sobic.003G328500 0.5kb downstream 0.5kb downstream 3382 true Chr03: 65389212-65392593 Sorghum bicolor
Sobic.003G328500 0.5kb downstream 0.5kb downstream 500 false Chr03: 65389212-65389711 Sorghum bicolor
Sobic.003G328500 1.0kb upstream 1.0kb upstream 3882 true Chr03: 65389712-65393593 Sorghum bicolor
Sobic.003G328500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 65392594-65393593 Sorghum bicolor
Sobic.003G328500 1.0kb downstream 1.0kb downstream 3882 true Chr03: 65388712-65392593 Sorghum bicolor
Sobic.003G328500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 65388712-65389711 Sorghum bicolor
Sobic.003G328500 2.0kb upstream 2.0kb upstream 4882 true Chr03: 65389712-65394593 Sorghum bicolor
Sobic.003G328500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 65392594-65394593 Sorghum bicolor
Sobic.003G328500 2.0kb downstream 2.0kb downstream 4882 true Chr03: 65387712-65392593 Sorghum bicolor
Sobic.003G328500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 65387712-65389711 Sorghum bicolor
Sobic.003G328500 5.0kb upstream 5.0kb upstream 7882 true Chr03: 65389712-65397593 Sorghum bicolor
Sobic.003G328500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 65392594-65397593 Sorghum bicolor
Sobic.003G328500 5.0kb downstream 5.0kb downstream 7882 true Chr03: 65384712-65392593 Sorghum bicolor
Sobic.003G328500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 65384712-65389711 Sorghum bicolor
Sobic.003G328500 10.0kb upstream 10.0kb upstream 12882 true Chr03: 65389712-65402593 Sorghum bicolor
Sobic.003G328500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 65392594-65402593 Sorghum bicolor
Sobic.003G328500 10.0kb downstream 10.0kb downstream 12882 true Chr03: 65379712-65392593 Sorghum bicolor
Sobic.003G328500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 65379712-65389711 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179510 5267 Panicoideae View MSA
124582720 5269 Grass View MSA
122046684 5273 Angiosperm View MSA
123429011 5275 Viridiplantae View MSA
121349995 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.096       Low
cufflinks 0.077       Low
cufflinks 0.021     Low Low
cufflinks 0.005     Low Low
cufflinks 40.36     High High
cufflinks 1.214        
cufflinks 27.659     High  
cufflinks 0.939        
cufflinks 0.29        
cufflinks 1.998        
cufflinks 25.643     High  
cufflinks 13.592     High  
cufflinks 0.728        
cufflinks 15.747     High  
cufflinks 8.657        
cufflinks 0.11       Low
cufflinks 28.626     High  
cufflinks 29.676     High  
cufflinks 0.826        
cufflinks 20.847     High  
cufflinks 74.928     High High
cufflinks 18.185     High  
cufflinks 17.608     High  
cufflinks 19.233     High  
cufflinks 0.031     Low Low
cufflinks 0.04       Low
cufflinks 6.019        
cufflinks 0.258        
cufflinks 1.261        
cufflinks 17.541     High  

0 Strain