Gene : Sobic.003G331400 S. bicolor v3.1.1
Defline:  similar to P0432B10.2 protein Genomic Order:  3486
Name:  ? Sobic.003G331400 Secondary Identifier:  ? PAC:37913198
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G331400 0.5kb upstream 0.5kb upstream 9694 true Chr03: 65614124-65623817 Sorghum bicolor
Sobic.003G331400 0.5kb upstream 0.5kb upstream 500 false Chr03: 65614124-65614623 Sorghum bicolor
Sobic.003G331400 0.5kb downstream 0.5kb downstream 9694 true Chr03: 65614624-65624317 Sorghum bicolor
Sobic.003G331400 0.5kb downstream 0.5kb downstream 500 false Chr03: 65623818-65624317 Sorghum bicolor
Sobic.003G331400 1.0kb upstream 1.0kb upstream 10194 true Chr03: 65613624-65623817 Sorghum bicolor
Sobic.003G331400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 65613624-65614623 Sorghum bicolor
Sobic.003G331400 1.0kb downstream 1.0kb downstream 10194 true Chr03: 65614624-65624817 Sorghum bicolor
Sobic.003G331400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 65623818-65624817 Sorghum bicolor
Sobic.003G331400 2.0kb upstream 2.0kb upstream 11194 true Chr03: 65612624-65623817 Sorghum bicolor
Sobic.003G331400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 65612624-65614623 Sorghum bicolor
Sobic.003G331400 2.0kb downstream 2.0kb downstream 11194 true Chr03: 65614624-65625817 Sorghum bicolor
Sobic.003G331400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 65623818-65625817 Sorghum bicolor
Sobic.003G331400 5.0kb upstream 5.0kb upstream 14194 true Chr03: 65609624-65623817 Sorghum bicolor
Sobic.003G331400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 65609624-65614623 Sorghum bicolor
Sobic.003G331400 5.0kb downstream 5.0kb downstream 14194 true Chr03: 65614624-65628817 Sorghum bicolor
Sobic.003G331400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 65623818-65628817 Sorghum bicolor
Sobic.003G331400 10.0kb upstream 10.0kb upstream 19194 true Chr03: 65604624-65623817 Sorghum bicolor
Sobic.003G331400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 65604624-65614623 Sorghum bicolor
Sobic.003G331400 10.0kb downstream 10.0kb downstream 19194 true Chr03: 65614624-65633817 Sorghum bicolor
Sobic.003G331400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 65623818-65633817 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122174955 5267 Panicoideae View MSA
124577395 5269 Grass View MSA
122043961 5273 Angiosperm View MSA
121310217 5274 Embryophyte View MSA
123347767 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.105       Low
cufflinks 1.8       Low
cufflinks 6.827        
cufflinks 8.706        
cufflinks 7.291        
cufflinks 7.755        
cufflinks 4.52        
cufflinks 1.824       Low
cufflinks 14.331     High High
cufflinks 11.869     High  
cufflinks 12.984     High  
cufflinks 18.824     High High
cufflinks 8.799        
cufflinks 13.268     High  
cufflinks 7.632        
cufflinks 3.257        
cufflinks 4.988        
cufflinks 4.236        
cufflinks 4.065        
cufflinks 8.081        
cufflinks 5.228        
cufflinks 10.842        
cufflinks 15.53     High High
cufflinks 15.437     High High
cufflinks 3.992        
cufflinks 1.961       Low
cufflinks 13.968     High High
cufflinks 1.81       Low
cufflinks 2.477       Low
cufflinks 6.58        

0 Strain