Gene : Sobic.003G331500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31852:SF0 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Genomic Order:  3487
Name:  ? Sobic.003G331500 Secondary Identifier:  ? PAC:37914050
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G331500 0.5kb upstream 0.5kb upstream 1400 true Chr03: 65627267-65628666 Sorghum bicolor
Sobic.003G331500 0.5kb upstream 0.5kb upstream 500 false Chr03: 65627267-65627766 Sorghum bicolor
Sobic.003G331500 0.5kb downstream 0.5kb downstream 1400 true Chr03: 65627767-65629166 Sorghum bicolor
Sobic.003G331500 0.5kb downstream 0.5kb downstream 500 false Chr03: 65628667-65629166 Sorghum bicolor
Sobic.003G331500 1.0kb upstream 1.0kb upstream 1900 true Chr03: 65626767-65628666 Sorghum bicolor
Sobic.003G331500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 65626767-65627766 Sorghum bicolor
Sobic.003G331500 1.0kb downstream 1.0kb downstream 1900 true Chr03: 65627767-65629666 Sorghum bicolor
Sobic.003G331500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 65628667-65629666 Sorghum bicolor
Sobic.003G331500 2.0kb upstream 2.0kb upstream 2900 true Chr03: 65625767-65628666 Sorghum bicolor
Sobic.003G331500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 65625767-65627766 Sorghum bicolor
Sobic.003G331500 2.0kb downstream 2.0kb downstream 2900 true Chr03: 65627767-65630666 Sorghum bicolor
Sobic.003G331500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 65628667-65630666 Sorghum bicolor
Sobic.003G331500 5.0kb upstream 5.0kb upstream 5900 true Chr03: 65622767-65628666 Sorghum bicolor
Sobic.003G331500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 65622767-65627766 Sorghum bicolor
Sobic.003G331500 5.0kb downstream 5.0kb downstream 5900 true Chr03: 65627767-65633666 Sorghum bicolor
Sobic.003G331500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 65628667-65633666 Sorghum bicolor
Sobic.003G331500 10.0kb upstream 10.0kb upstream 10900 true Chr03: 65617767-65628666 Sorghum bicolor
Sobic.003G331500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 65617767-65627766 Sorghum bicolor
Sobic.003G331500 10.0kb downstream 10.0kb downstream 10900 true Chr03: 65627767-65638666 Sorghum bicolor
Sobic.003G331500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 65628667-65638666 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182712 5267 Panicoideae View MSA
124575563 5269 Grass View MSA
122042676 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.153       High
cufflinks 0.055       Low
cufflinks 0.918        
cufflinks 1.399        
cufflinks 1.506        
cufflinks 0.97        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low Low
cufflinks 0.281        
cufflinks 0.16        
cufflinks 0.448        
cufflinks 0.153        
cufflinks 0.469        
cufflinks 0.263        
cufflinks 0.517        
cufflinks 0.091       Low
cufflinks 0.045     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.316        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.57        
cufflinks 0.148        
cufflinks 0.186        
cufflinks 0.068       Low
cufflinks 0.075       Low
cufflinks 0.982        
cufflinks 3.718       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.705        

0 Strain