Gene : Sobic.003G330000 S. bicolor v3.1.1
Defline:  (1 of 1) K14769 - U3 small nucleolar RNA-associated protein 11 (UTP11) Genomic Order:  3472
Name:  ? Sobic.003G330000 Secondary Identifier:  ? PAC:37915390
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G330000 0.5kb upstream 0.5kb upstream 2976 true Chr03: 65516858-65519833 Sorghum bicolor
Sobic.003G330000 0.5kb upstream 0.5kb upstream 500 false Chr03: 65519334-65519833 Sorghum bicolor
Sobic.003G330000 0.5kb downstream 0.5kb downstream 2976 true Chr03: 65516358-65519333 Sorghum bicolor
Sobic.003G330000 0.5kb downstream 0.5kb downstream 500 false Chr03: 65516358-65516857 Sorghum bicolor
Sobic.003G330000 1.0kb upstream 1.0kb upstream 3476 true Chr03: 65516858-65520333 Sorghum bicolor
Sobic.003G330000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 65519334-65520333 Sorghum bicolor
Sobic.003G330000 1.0kb downstream 1.0kb downstream 3476 true Chr03: 65515858-65519333 Sorghum bicolor
Sobic.003G330000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 65515858-65516857 Sorghum bicolor
Sobic.003G330000 2.0kb upstream 2.0kb upstream 4476 true Chr03: 65516858-65521333 Sorghum bicolor
Sobic.003G330000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 65519334-65521333 Sorghum bicolor
Sobic.003G330000 2.0kb downstream 2.0kb downstream 4476 true Chr03: 65514858-65519333 Sorghum bicolor
Sobic.003G330000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 65514858-65516857 Sorghum bicolor
Sobic.003G330000 5.0kb upstream 5.0kb upstream 7476 true Chr03: 65516858-65524333 Sorghum bicolor
Sobic.003G330000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 65519334-65524333 Sorghum bicolor
Sobic.003G330000 5.0kb downstream 5.0kb downstream 7476 true Chr03: 65511858-65519333 Sorghum bicolor
Sobic.003G330000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 65511858-65516857 Sorghum bicolor
Sobic.003G330000 10.0kb upstream 10.0kb upstream 12476 true Chr03: 65516858-65529333 Sorghum bicolor
Sobic.003G330000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 65519334-65529333 Sorghum bicolor
Sobic.003G330000 10.0kb downstream 10.0kb downstream 12476 true Chr03: 65506858-65519333 Sorghum bicolor
Sobic.003G330000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 65506858-65516857 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026243 5273 Angiosperm View MSA
122179639 5267 Panicoideae View MSA
124578921 5269 Grass View MSA
121350042 5274 Embryophyte View MSA
123425029 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.842     High High
cufflinks 1.053       Low
cufflinks 3.484        
cufflinks 7.589        
cufflinks 5.569        
cufflinks 3.766        
cufflinks 6.074        
cufflinks 1.976       Low
cufflinks 6.297        
cufflinks 5.582        
cufflinks 8.824        
cufflinks 8.593        
cufflinks 3.811        
cufflinks 8.245        
cufflinks 5.364        
cufflinks 3.243        
cufflinks 7.083        
cufflinks 7.378        
cufflinks 2.497       Low
cufflinks 9.501        
cufflinks 10.521       High
cufflinks 9.321        
cufflinks 10.508       High
cufflinks 9.56        
cufflinks 1.628       Low
cufflinks 0.896       Low
cufflinks 5.766        
cufflinks 4.422        
cufflinks 5.142        
cufflinks 8.239        

0 Strain