Gene : Sobic.003G332100 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR23089:SF12 - HIS TRIAD FAMILY PROTEIN 3 Genomic Order:  3495
Name:  ? Sobic.003G332100 Secondary Identifier:  ? PAC:37912737
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G332100 0.5kb upstream 0.5kb upstream 4183 true Chr03: 65656587-65660769 Sorghum bicolor
Sobic.003G332100 0.5kb upstream 0.5kb upstream 500 false Chr03: 65660270-65660769 Sorghum bicolor
Sobic.003G332100 0.5kb downstream 0.5kb downstream 4183 true Chr03: 65656087-65660269 Sorghum bicolor
Sobic.003G332100 0.5kb downstream 0.5kb downstream 500 false Chr03: 65656087-65656586 Sorghum bicolor
Sobic.003G332100 1.0kb upstream 1.0kb upstream 4683 true Chr03: 65656587-65661269 Sorghum bicolor
Sobic.003G332100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 65660270-65661269 Sorghum bicolor
Sobic.003G332100 1.0kb downstream 1.0kb downstream 4683 true Chr03: 65655587-65660269 Sorghum bicolor
Sobic.003G332100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 65655587-65656586 Sorghum bicolor
Sobic.003G332100 2.0kb upstream 2.0kb upstream 5683 true Chr03: 65656587-65662269 Sorghum bicolor
Sobic.003G332100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 65660270-65662269 Sorghum bicolor
Sobic.003G332100 2.0kb downstream 2.0kb downstream 5683 true Chr03: 65654587-65660269 Sorghum bicolor
Sobic.003G332100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 65654587-65656586 Sorghum bicolor
Sobic.003G332100 5.0kb upstream 5.0kb upstream 8683 true Chr03: 65656587-65665269 Sorghum bicolor
Sobic.003G332100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 65660270-65665269 Sorghum bicolor
Sobic.003G332100 5.0kb downstream 5.0kb downstream 8683 true Chr03: 65651587-65660269 Sorghum bicolor
Sobic.003G332100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 65651587-65656586 Sorghum bicolor
Sobic.003G332100 10.0kb upstream 10.0kb upstream 13683 true Chr03: 65656587-65670269 Sorghum bicolor
Sobic.003G332100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 65660270-65670269 Sorghum bicolor
Sobic.003G332100 10.0kb downstream 10.0kb downstream 13683 true Chr03: 65646587-65660269 Sorghum bicolor
Sobic.003G332100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 65646587-65656586 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176728 5267 Panicoideae View MSA
124581976 5269 Grass View MSA
122041956 5273 Angiosperm View MSA
121349409 5274 Embryophyte View MSA
123425482 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.73       Low
cufflinks 0.92       Low
cufflinks 2.221        
cufflinks 3.975       High
cufflinks 1.782        
cufflinks 4.106       High
cufflinks 1.864        
cufflinks 2.166        
cufflinks 4.561       High
cufflinks 5.238       High
cufflinks 1.632        
cufflinks 2.202        
cufflinks 4.327       High
cufflinks 1.523        
cufflinks 2.624        
cufflinks 2.151        
cufflinks 1.84        
cufflinks 1.909        
cufflinks 2.056        
cufflinks 2.725        
cufflinks 2.283        
cufflinks 1.832        
cufflinks 1.562        
cufflinks 1.728        
cufflinks 1.799        
cufflinks 1.013       Low
cufflinks 1.877        
cufflinks 0.467       Low
cufflinks 2.393        
cufflinks 3.318        

0 Strain