Gene : Sobic.003G335900 S. bicolor v3.1.1
Defline:  (1 of 29) PF04525 - LURP-one-related (LOR) Genomic Order:  3532
Name:  ? Sobic.003G335900 Secondary Identifier:  ? PAC:37914747
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G335900 0.5kb upstream 0.5kb upstream 2461 true Chr03: 65915154-65917614 Sorghum bicolor
Sobic.003G335900 0.5kb upstream 0.5kb upstream 500 false Chr03: 65915154-65915653 Sorghum bicolor
Sobic.003G335900 0.5kb downstream 0.5kb downstream 2461 true Chr03: 65915654-65918114 Sorghum bicolor
Sobic.003G335900 0.5kb downstream 0.5kb downstream 500 false Chr03: 65917615-65918114 Sorghum bicolor
Sobic.003G335900 1.0kb upstream 1.0kb upstream 2961 true Chr03: 65914654-65917614 Sorghum bicolor
Sobic.003G335900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 65914654-65915653 Sorghum bicolor
Sobic.003G335900 1.0kb downstream 1.0kb downstream 2961 true Chr03: 65915654-65918614 Sorghum bicolor
Sobic.003G335900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 65917615-65918614 Sorghum bicolor
Sobic.003G335900 2.0kb upstream 2.0kb upstream 3961 true Chr03: 65913654-65917614 Sorghum bicolor
Sobic.003G335900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 65913654-65915653 Sorghum bicolor
Sobic.003G335900 2.0kb downstream 2.0kb downstream 3961 true Chr03: 65915654-65919614 Sorghum bicolor
Sobic.003G335900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 65917615-65919614 Sorghum bicolor
Sobic.003G335900 5.0kb upstream 5.0kb upstream 6961 true Chr03: 65910654-65917614 Sorghum bicolor
Sobic.003G335900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 65910654-65915653 Sorghum bicolor
Sobic.003G335900 5.0kb downstream 5.0kb downstream 6961 true Chr03: 65915654-65922614 Sorghum bicolor
Sobic.003G335900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 65917615-65922614 Sorghum bicolor
Sobic.003G335900 10.0kb upstream 10.0kb upstream 11961 true Chr03: 65905654-65917614 Sorghum bicolor
Sobic.003G335900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 65905654-65915653 Sorghum bicolor
Sobic.003G335900 10.0kb downstream 10.0kb downstream 11961 true Chr03: 65915654-65927614 Sorghum bicolor
Sobic.003G335900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 65917615-65927614 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185212 5267 Panicoideae View MSA
124580707 5269 Grass View MSA
122048433 5273 Angiosperm View MSA
121310971 5274 Embryophyte View MSA
123348336 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.738       Low
cufflinks 2.361        
cufflinks 0.674       Low
cufflinks 1.051        
cufflinks 0.525       Low
cufflinks 15.223     High High
cufflinks 4.903        
cufflinks 6.758       High
cufflinks 2.101        
cufflinks 2.816        
cufflinks 4.009        
cufflinks 4.772        
cufflinks 3.303        
cufflinks 3.879        
cufflinks 1.673        
cufflinks 3.016        
cufflinks 4.349        
cufflinks 5.102        
cufflinks 2.782        
cufflinks 6.451       High
cufflinks 0.188       Low
cufflinks 3.079        
cufflinks 6.1       High
cufflinks 4.061        
cufflinks 3.806        
cufflinks 1.658        
cufflinks 2.236        
cufflinks 0.245       Low
cufflinks 9.974       High
cufflinks 1.686        

0 Strain