Gene : Sobic.003G338000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12668:SF19 - NON-GREEN PLASTID INNER ENVELOPE MEMBRANE PROTEIN-RELATED Genomic Order:  3554
Name:  ? Sobic.003G338000 Secondary Identifier:  ? PAC:37917912
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G338000 0.5kb upstream 0.5kb upstream 5454 true Chr03: 66106852-66112305 Sorghum bicolor
Sobic.003G338000 0.5kb upstream 0.5kb upstream 500 false Chr03: 66111806-66112305 Sorghum bicolor
Sobic.003G338000 0.5kb downstream 0.5kb downstream 5454 true Chr03: 66106352-66111805 Sorghum bicolor
Sobic.003G338000 0.5kb downstream 0.5kb downstream 500 false Chr03: 66106352-66106851 Sorghum bicolor
Sobic.003G338000 1.0kb upstream 1.0kb upstream 5954 true Chr03: 66106852-66112805 Sorghum bicolor
Sobic.003G338000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 66111806-66112805 Sorghum bicolor
Sobic.003G338000 1.0kb downstream 1.0kb downstream 5954 true Chr03: 66105852-66111805 Sorghum bicolor
Sobic.003G338000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 66105852-66106851 Sorghum bicolor
Sobic.003G338000 2.0kb upstream 2.0kb upstream 6954 true Chr03: 66106852-66113805 Sorghum bicolor
Sobic.003G338000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 66111806-66113805 Sorghum bicolor
Sobic.003G338000 2.0kb downstream 2.0kb downstream 6954 true Chr03: 66104852-66111805 Sorghum bicolor
Sobic.003G338000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 66104852-66106851 Sorghum bicolor
Sobic.003G338000 5.0kb upstream 5.0kb upstream 9954 true Chr03: 66106852-66116805 Sorghum bicolor
Sobic.003G338000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 66111806-66116805 Sorghum bicolor
Sobic.003G338000 5.0kb downstream 5.0kb downstream 9954 true Chr03: 66101852-66111805 Sorghum bicolor
Sobic.003G338000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 66101852-66106851 Sorghum bicolor
Sobic.003G338000 10.0kb upstream 10.0kb upstream 14954 true Chr03: 66106852-66121805 Sorghum bicolor
Sobic.003G338000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 66111806-66121805 Sorghum bicolor
Sobic.003G338000 10.0kb downstream 10.0kb downstream 14954 true Chr03: 66096852-66111805 Sorghum bicolor
Sobic.003G338000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 66096852-66106851 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188640 5267 Panicoideae View MSA
124580280 5269 Grass View MSA
122046844 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.221        
cufflinks 5.924        
cufflinks 5.968        
cufflinks 14.811     High High
cufflinks 9.246        
cufflinks 5.621        
cufflinks 9.551       High
cufflinks 6.034        
cufflinks 5.552        
cufflinks 6.376        
cufflinks 5.298        
cufflinks 6.404        
cufflinks 3.051       Low
cufflinks 6.856        
cufflinks 4.1       Low
cufflinks 5.381        
cufflinks 9.997       High
cufflinks 10.624       High
cufflinks 3.282       Low
cufflinks 12.403     High High
cufflinks 8.191        
cufflinks 5.961        
cufflinks 6.458        
cufflinks 6.922        
cufflinks 8.834     High  
cufflinks 4.399       Low
cufflinks 5.684        
cufflinks 5.339        
cufflinks 11.859     High High
cufflinks 6.505        

0 Strain