Gene : Sobic.003G340500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR32444//PTHR32444:SF6 - FAMILY NOT NAMED // D-MANNOSE BINDING LECTIN PROTEIN WITH APPLE-LIKE CARBOHYDRATE-BINDING DOMAIN Genomic Order:  3582
Name:  ? Sobic.003G340500 Secondary Identifier:  ? PAC:37913580
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G340500 0.5kb upstream 0.5kb upstream 3977 true Chr03: 66346593-66350569 Sorghum bicolor
Sobic.003G340500 0.5kb upstream 0.5kb upstream 500 false Chr03: 66350070-66350569 Sorghum bicolor
Sobic.003G340500 0.5kb downstream 0.5kb downstream 3977 true Chr03: 66346093-66350069 Sorghum bicolor
Sobic.003G340500 0.5kb downstream 0.5kb downstream 500 false Chr03: 66346093-66346592 Sorghum bicolor
Sobic.003G340500 1.0kb upstream 1.0kb upstream 4477 true Chr03: 66346593-66351069 Sorghum bicolor
Sobic.003G340500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 66350070-66351069 Sorghum bicolor
Sobic.003G340500 1.0kb downstream 1.0kb downstream 4477 true Chr03: 66345593-66350069 Sorghum bicolor
Sobic.003G340500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 66345593-66346592 Sorghum bicolor
Sobic.003G340500 2.0kb upstream 2.0kb upstream 5477 true Chr03: 66346593-66352069 Sorghum bicolor
Sobic.003G340500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 66350070-66352069 Sorghum bicolor
Sobic.003G340500 2.0kb downstream 2.0kb downstream 5477 true Chr03: 66344593-66350069 Sorghum bicolor
Sobic.003G340500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 66344593-66346592 Sorghum bicolor
Sobic.003G340500 5.0kb upstream 5.0kb upstream 8477 true Chr03: 66346593-66355069 Sorghum bicolor
Sobic.003G340500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 66350070-66355069 Sorghum bicolor
Sobic.003G340500 5.0kb downstream 5.0kb downstream 8477 true Chr03: 66341593-66350069 Sorghum bicolor
Sobic.003G340500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 66341593-66346592 Sorghum bicolor
Sobic.003G340500 10.0kb upstream 10.0kb upstream 13477 true Chr03: 66346593-66360069 Sorghum bicolor
Sobic.003G340500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 66350070-66360069 Sorghum bicolor
Sobic.003G340500 10.0kb downstream 10.0kb downstream 13477 true Chr03: 66336593-66350069 Sorghum bicolor
Sobic.003G340500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 66336593-66346592 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029223 5273 Angiosperm View MSA
122183942 5267 Panicoideae View MSA
124572419 5269 Grass View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  

0 Strain