Gene : Sobic.003G284100 S. bicolor v3.1.1
Defline:  similar to Os01g0729500 protein Genomic Order:  2989
Name:  ? Sobic.003G284100 Secondary Identifier:  ? PAC:37918426
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G284100 0.5kb upstream 0.5kb upstream 1368 true Chr03: 61809614-61810981 Sorghum bicolor
Sobic.003G284100 0.5kb upstream 0.5kb upstream 500 false Chr03: 61810482-61810981 Sorghum bicolor
Sobic.003G284100 0.5kb downstream 0.5kb downstream 1368 true Chr03: 61809114-61810481 Sorghum bicolor
Sobic.003G284100 0.5kb downstream 0.5kb downstream 500 false Chr03: 61809114-61809613 Sorghum bicolor
Sobic.003G284100 1.0kb upstream 1.0kb upstream 1868 true Chr03: 61809614-61811481 Sorghum bicolor
Sobic.003G284100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 61810482-61811481 Sorghum bicolor
Sobic.003G284100 1.0kb downstream 1.0kb downstream 1868 true Chr03: 61808614-61810481 Sorghum bicolor
Sobic.003G284100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 61808614-61809613 Sorghum bicolor
Sobic.003G284100 2.0kb upstream 2.0kb upstream 2868 true Chr03: 61809614-61812481 Sorghum bicolor
Sobic.003G284100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 61810482-61812481 Sorghum bicolor
Sobic.003G284100 2.0kb downstream 2.0kb downstream 2868 true Chr03: 61807614-61810481 Sorghum bicolor
Sobic.003G284100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 61807614-61809613 Sorghum bicolor
Sobic.003G284100 5.0kb upstream 5.0kb upstream 5868 true Chr03: 61809614-61815481 Sorghum bicolor
Sobic.003G284100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 61810482-61815481 Sorghum bicolor
Sobic.003G284100 5.0kb downstream 5.0kb downstream 5868 true Chr03: 61804614-61810481 Sorghum bicolor
Sobic.003G284100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 61804614-61809613 Sorghum bicolor
Sobic.003G284100 10.0kb upstream 10.0kb upstream 10868 true Chr03: 61809614-61820481 Sorghum bicolor
Sobic.003G284100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 61810482-61820481 Sorghum bicolor
Sobic.003G284100 10.0kb downstream 10.0kb downstream 10868 true Chr03: 61799614-61810481 Sorghum bicolor
Sobic.003G284100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 61799614-61809613 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187729 5267 Panicoideae View MSA
124581552 5269 Grass View MSA
122048544 5273 Angiosperm View MSA
121311015 5274 Embryophyte View MSA
123348373 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.408       High
cufflinks 1.267        
cufflinks 1.162        
cufflinks 1.453        
cufflinks 0.911        
cufflinks 3.457       High
cufflinks 1.344        
cufflinks 0.864        
cufflinks 0.658        
cufflinks 0.662        
cufflinks 0.851        
cufflinks 0.568       Low
cufflinks 0.909        
cufflinks 0.673        
cufflinks 2.297       High
cufflinks 1.269        
cufflinks 1.286        
cufflinks 1.503        
cufflinks 1.415        
cufflinks 1.662        
cufflinks 0.449       Low
cufflinks 1.489        
cufflinks 0.844        
cufflinks 0.465       Low
cufflinks 0.84        
cufflinks 0.503       Low
cufflinks 0.51       Low
cufflinks 1.132        
cufflinks 1.975       High
cufflinks 1.691        

0 Strain