Gene : Sobic.003G284800 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR24078:SF255 - DNAJ HOMOLOG DNJ-5 Genomic Order:  2996
Name:  ? Sobic.003G284800 Secondary Identifier:  ? PAC:37918668
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G284800 0.5kb upstream 0.5kb upstream 3191 true Chr03: 61846734-61849924 Sorghum bicolor
Sobic.003G284800 0.5kb upstream 0.5kb upstream 500 false Chr03: 61846734-61847233 Sorghum bicolor
Sobic.003G284800 0.5kb downstream 0.5kb downstream 3191 true Chr03: 61847234-61850424 Sorghum bicolor
Sobic.003G284800 0.5kb downstream 0.5kb downstream 500 false Chr03: 61849925-61850424 Sorghum bicolor
Sobic.003G284800 1.0kb upstream 1.0kb upstream 3691 true Chr03: 61846234-61849924 Sorghum bicolor
Sobic.003G284800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 61846234-61847233 Sorghum bicolor
Sobic.003G284800 1.0kb downstream 1.0kb downstream 3691 true Chr03: 61847234-61850924 Sorghum bicolor
Sobic.003G284800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 61849925-61850924 Sorghum bicolor
Sobic.003G284800 2.0kb upstream 2.0kb upstream 4691 true Chr03: 61845234-61849924 Sorghum bicolor
Sobic.003G284800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 61845234-61847233 Sorghum bicolor
Sobic.003G284800 2.0kb downstream 2.0kb downstream 4691 true Chr03: 61847234-61851924 Sorghum bicolor
Sobic.003G284800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 61849925-61851924 Sorghum bicolor
Sobic.003G284800 5.0kb upstream 5.0kb upstream 7691 true Chr03: 61842234-61849924 Sorghum bicolor
Sobic.003G284800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 61842234-61847233 Sorghum bicolor
Sobic.003G284800 5.0kb downstream 5.0kb downstream 7691 true Chr03: 61847234-61854924 Sorghum bicolor
Sobic.003G284800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 61849925-61854924 Sorghum bicolor
Sobic.003G284800 10.0kb upstream 10.0kb upstream 12691 true Chr03: 61837234-61849924 Sorghum bicolor
Sobic.003G284800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 61837234-61847233 Sorghum bicolor
Sobic.003G284800 10.0kb downstream 10.0kb downstream 12691 true Chr03: 61847234-61859924 Sorghum bicolor
Sobic.003G284800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 61849925-61859924 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180968 5267 Panicoideae View MSA
124575882 5269 Grass View MSA
122045316 5273 Angiosperm View MSA
121346965 5274 Embryophyte View MSA
123428421 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.54        
cufflinks 71.224     High High
cufflinks 19.739     High High
cufflinks 4.551        
cufflinks 0.03     Low  
cufflinks 4.262        
cufflinks 8.619        
cufflinks 9.867     High High
cufflinks 0.013     Low Low
cufflinks 0.029     Low  
cufflinks 0.066     Low  
cufflinks 0.04     Low  
cufflinks 0.006     Low Low
cufflinks 0.026     Low  
cufflinks 0.562        
cufflinks 66.006     High High
cufflinks 9.338       High
cufflinks 7.857        
cufflinks 21.617     High High
cufflinks 8.059        
cufflinks 0.065     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.054     Low  
cufflinks 0.029     Low  
cufflinks 61.994     High High
cufflinks 64.698     High High
cufflinks 0.032     Low  
cufflinks 0.196        
cufflinks 1.252        
cufflinks 0.385        

0 Strain