Gene : Sobic.003G288800 S. bicolor v3.1.1
Defline:  (1 of 2) K08073 - bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78] (PNKP) Genomic Order:  3039
Name:  ? Sobic.003G288800 Secondary Identifier:  ? PAC:37918561
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G288800 0.5kb upstream 0.5kb upstream 10087 true Chr03: 62169976-62180062 Sorghum bicolor
Sobic.003G288800 0.5kb upstream 0.5kb upstream 500 false Chr03: 62169976-62170475 Sorghum bicolor
Sobic.003G288800 0.5kb downstream 0.5kb downstream 10087 true Chr03: 62170476-62180562 Sorghum bicolor
Sobic.003G288800 0.5kb downstream 0.5kb downstream 500 false Chr03: 62180063-62180562 Sorghum bicolor
Sobic.003G288800 1.0kb upstream 1.0kb upstream 10587 true Chr03: 62169476-62180062 Sorghum bicolor
Sobic.003G288800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 62169476-62170475 Sorghum bicolor
Sobic.003G288800 1.0kb downstream 1.0kb downstream 10587 true Chr03: 62170476-62181062 Sorghum bicolor
Sobic.003G288800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 62180063-62181062 Sorghum bicolor
Sobic.003G288800 2.0kb upstream 2.0kb upstream 11587 true Chr03: 62168476-62180062 Sorghum bicolor
Sobic.003G288800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 62168476-62170475 Sorghum bicolor
Sobic.003G288800 2.0kb downstream 2.0kb downstream 11587 true Chr03: 62170476-62182062 Sorghum bicolor
Sobic.003G288800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 62180063-62182062 Sorghum bicolor
Sobic.003G288800 5.0kb upstream 5.0kb upstream 14587 true Chr03: 62165476-62180062 Sorghum bicolor
Sobic.003G288800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 62165476-62170475 Sorghum bicolor
Sobic.003G288800 5.0kb downstream 5.0kb downstream 14587 true Chr03: 62170476-62185062 Sorghum bicolor
Sobic.003G288800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 62180063-62185062 Sorghum bicolor
Sobic.003G288800 10.0kb upstream 10.0kb upstream 19587 true Chr03: 62160476-62180062 Sorghum bicolor
Sobic.003G288800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 62160476-62170475 Sorghum bicolor
Sobic.003G288800 10.0kb downstream 10.0kb downstream 19587 true Chr03: 62170476-62190062 Sorghum bicolor
Sobic.003G288800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 62180063-62190062 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187723 5267 Panicoideae View MSA
124588468 5269 Grass View MSA
122048417 5273 Angiosperm View MSA
121348485 5274 Embryophyte View MSA
123426265 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.354        
cufflinks 0.465       High
cufflinks 0.166       Low
cufflinks 0.26        
cufflinks 0.278        
cufflinks 0.286        
cufflinks 0.279        
cufflinks 0.144       Low
cufflinks 0.362        
cufflinks 0.651       High
cufflinks 0.255        
cufflinks 0.195        
cufflinks 0.464       High
cufflinks 0.18        
cufflinks 0.308        
cufflinks 0.288        
cufflinks 0.236        
cufflinks 0.275        
cufflinks 0.135       Low
cufflinks 0.311        
cufflinks 0.806       High
cufflinks 0.238        
cufflinks 0.193        
cufflinks 0.232        
cufflinks 0.325        
cufflinks 0.394        
cufflinks 0.197        
cufflinks 0.153       Low
cufflinks 0.192        
cufflinks 0.326        

0 Strain