Gene : Sobic.003G289700 S. bicolor v3.1.1
Defline:  (1 of 5) K16287 - ubiquitin-like-specific protease 1C/D [EC:3.4.22.68] (ULP1C_D) Genomic Order:  3048
Name:  ? Sobic.003G289700 Secondary Identifier:  ? PAC:37914543
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G289700 0.5kb upstream 0.5kb upstream 9469 true Chr03: 62213204-62222672 Sorghum bicolor
Sobic.003G289700 0.5kb upstream 0.5kb upstream 500 false Chr03: 62222173-62222672 Sorghum bicolor
Sobic.003G289700 0.5kb downstream 0.5kb downstream 9469 true Chr03: 62212704-62222172 Sorghum bicolor
Sobic.003G289700 0.5kb downstream 0.5kb downstream 500 false Chr03: 62212704-62213203 Sorghum bicolor
Sobic.003G289700 1.0kb upstream 1.0kb upstream 9969 true Chr03: 62213204-62223172 Sorghum bicolor
Sobic.003G289700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 62222173-62223172 Sorghum bicolor
Sobic.003G289700 1.0kb downstream 1.0kb downstream 9969 true Chr03: 62212204-62222172 Sorghum bicolor
Sobic.003G289700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 62212204-62213203 Sorghum bicolor
Sobic.003G289700 2.0kb upstream 2.0kb upstream 10969 true Chr03: 62213204-62224172 Sorghum bicolor
Sobic.003G289700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 62222173-62224172 Sorghum bicolor
Sobic.003G289700 2.0kb downstream 2.0kb downstream 10969 true Chr03: 62211204-62222172 Sorghum bicolor
Sobic.003G289700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 62211204-62213203 Sorghum bicolor
Sobic.003G289700 5.0kb upstream 5.0kb upstream 13969 true Chr03: 62213204-62227172 Sorghum bicolor
Sobic.003G289700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 62222173-62227172 Sorghum bicolor
Sobic.003G289700 5.0kb downstream 5.0kb downstream 13969 true Chr03: 62208204-62222172 Sorghum bicolor
Sobic.003G289700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 62208204-62213203 Sorghum bicolor
Sobic.003G289700 10.0kb upstream 10.0kb upstream 18969 true Chr03: 62213204-62232172 Sorghum bicolor
Sobic.003G289700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 62222173-62232172 Sorghum bicolor
Sobic.003G289700 10.0kb downstream 10.0kb downstream 18969 true Chr03: 62203204-62222172 Sorghum bicolor
Sobic.003G289700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 62203204-62213203 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195211 5267 Panicoideae View MSA
124581491 5269 Grass View MSA
122047902 5273 Angiosperm View MSA
123429184 5275 Viridiplantae View MSA
121351646 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.796        
cufflinks 0.261       Low
cufflinks 0.276       Low
cufflinks 0.238       Low
cufflinks 1.157       High
cufflinks 0.35        
cufflinks 0.55        
cufflinks 0.446        
cufflinks 0.526        
cufflinks 0.878        
cufflinks 0.616        
cufflinks 0.699        
cufflinks 0.566        
cufflinks 0.905        
cufflinks 1.922       High
cufflinks 0.318       Low
cufflinks 0.485        
cufflinks 0.675        
cufflinks 0.262       Low
cufflinks 0.495        
cufflinks 1.814       High
cufflinks 0.708        
cufflinks 0.825        
cufflinks 0.681        
cufflinks 0.167       Low
cufflinks 0.226       Low
cufflinks 0.604        
cufflinks 0.945        
cufflinks 0.696        
cufflinks 3.233       High

0 Strain