Gene : Sobic.003G291300 S. bicolor v3.1.1
Defline:  (1 of 1) K15507 - 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-] (MRM1, PET56) Genomic Order:  3066
Name:  ? Sobic.003G291300 Secondary Identifier:  ? PAC:37917438
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G291300 0.5kb upstream 0.5kb upstream 5848 true Chr03: 62396793-62402640 Sorghum bicolor
Sobic.003G291300 0.5kb upstream 0.5kb upstream 500 false Chr03: 62402141-62402640 Sorghum bicolor
Sobic.003G291300 0.5kb downstream 0.5kb downstream 5848 true Chr03: 62396293-62402140 Sorghum bicolor
Sobic.003G291300 0.5kb downstream 0.5kb downstream 500 false Chr03: 62396293-62396792 Sorghum bicolor
Sobic.003G291300 1.0kb upstream 1.0kb upstream 6348 true Chr03: 62396793-62403140 Sorghum bicolor
Sobic.003G291300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 62402141-62403140 Sorghum bicolor
Sobic.003G291300 1.0kb downstream 1.0kb downstream 6348 true Chr03: 62395793-62402140 Sorghum bicolor
Sobic.003G291300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 62395793-62396792 Sorghum bicolor
Sobic.003G291300 2.0kb upstream 2.0kb upstream 7348 true Chr03: 62396793-62404140 Sorghum bicolor
Sobic.003G291300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 62402141-62404140 Sorghum bicolor
Sobic.003G291300 2.0kb downstream 2.0kb downstream 7348 true Chr03: 62394793-62402140 Sorghum bicolor
Sobic.003G291300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 62394793-62396792 Sorghum bicolor
Sobic.003G291300 5.0kb upstream 5.0kb upstream 10348 true Chr03: 62396793-62407140 Sorghum bicolor
Sobic.003G291300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 62402141-62407140 Sorghum bicolor
Sobic.003G291300 5.0kb downstream 5.0kb downstream 10348 true Chr03: 62391793-62402140 Sorghum bicolor
Sobic.003G291300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 62391793-62396792 Sorghum bicolor
Sobic.003G291300 10.0kb upstream 10.0kb upstream 15348 true Chr03: 62396793-62412140 Sorghum bicolor
Sobic.003G291300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 62402141-62412140 Sorghum bicolor
Sobic.003G291300 10.0kb downstream 10.0kb downstream 15348 true Chr03: 62386793-62402140 Sorghum bicolor
Sobic.003G291300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 62386793-62396792 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195454 5267 Panicoideae View MSA
124575628 5269 Grass View MSA
122041601 5273 Angiosperm View MSA
121347404 5274 Embryophyte View MSA
123426930 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.641       High
cufflinks 0.46       Low
cufflinks 0.733        
cufflinks 1.406        
cufflinks 1.814        
cufflinks 0.718        
cufflinks 2.671       High
cufflinks 1.126        
cufflinks 1.036        
cufflinks 1.317        
cufflinks 0.752        
cufflinks 0.698        
cufflinks 0.783        
cufflinks 0.707        
cufflinks 0.977        
cufflinks 0.867        
cufflinks 3.046       High
cufflinks 3.73       High
cufflinks 0.722        
cufflinks 1.476        
cufflinks 4.287       High
cufflinks 0.693        
cufflinks 0.971        
cufflinks 1.039        
cufflinks 0.442       Low
cufflinks 0.355       Low
cufflinks 0.57        
cufflinks 0.772        
cufflinks 7.625       High
cufflinks 1.754        

0 Strain