Gene : Sobic.003G294300 S. bicolor v3.1.1
Defline:  (1 of 1) KOG4837 - Uncharacterized conserved protein Genomic Order:  3099
Name:  ? Sobic.003G294300 Secondary Identifier:  ? PAC:37917741
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G294300 0.5kb upstream 0.5kb upstream 7302 true Chr03: 62657394-62664695 Sorghum bicolor
Sobic.003G294300 0.5kb upstream 0.5kb upstream 500 false Chr03: 62657394-62657893 Sorghum bicolor
Sobic.003G294300 0.5kb downstream 0.5kb downstream 7302 true Chr03: 62657894-62665195 Sorghum bicolor
Sobic.003G294300 0.5kb downstream 0.5kb downstream 500 false Chr03: 62664696-62665195 Sorghum bicolor
Sobic.003G294300 1.0kb upstream 1.0kb upstream 7802 true Chr03: 62656894-62664695 Sorghum bicolor
Sobic.003G294300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 62656894-62657893 Sorghum bicolor
Sobic.003G294300 1.0kb downstream 1.0kb downstream 7802 true Chr03: 62657894-62665695 Sorghum bicolor
Sobic.003G294300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 62664696-62665695 Sorghum bicolor
Sobic.003G294300 2.0kb upstream 2.0kb upstream 8802 true Chr03: 62655894-62664695 Sorghum bicolor
Sobic.003G294300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 62655894-62657893 Sorghum bicolor
Sobic.003G294300 2.0kb downstream 2.0kb downstream 8802 true Chr03: 62657894-62666695 Sorghum bicolor
Sobic.003G294300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 62664696-62666695 Sorghum bicolor
Sobic.003G294300 5.0kb upstream 5.0kb upstream 11802 true Chr03: 62652894-62664695 Sorghum bicolor
Sobic.003G294300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 62652894-62657893 Sorghum bicolor
Sobic.003G294300 5.0kb downstream 5.0kb downstream 11802 true Chr03: 62657894-62669695 Sorghum bicolor
Sobic.003G294300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 62664696-62669695 Sorghum bicolor
Sobic.003G294300 10.0kb upstream 10.0kb upstream 16802 true Chr03: 62647894-62664695 Sorghum bicolor
Sobic.003G294300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 62647894-62657893 Sorghum bicolor
Sobic.003G294300 10.0kb downstream 10.0kb downstream 16802 true Chr03: 62657894-62674695 Sorghum bicolor
Sobic.003G294300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 62664696-62674695 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041163 5273 Angiosperm View MSA
122180719 5267 Panicoideae View MSA
124573350 5269 Grass View MSA
121346685 5274 Embryophyte View MSA
123425095 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.694       Low
cufflinks 4.789        
cufflinks 7.183       High
cufflinks 6.715       High
cufflinks 9.033       High
cufflinks 6.645       High
cufflinks 4.88        
cufflinks 4.744        
cufflinks 4.697        
cufflinks 5.075        
cufflinks 2.374       Low
cufflinks 3.31        
cufflinks 6.096        
cufflinks 2.524       Low
cufflinks 4.951        
cufflinks 4.285        
cufflinks 4.766        
cufflinks 5.197        
cufflinks 2.75       Low
cufflinks 5.887        
cufflinks 4.227        
cufflinks 2.579       Low
cufflinks 2.514       Low
cufflinks 2.265       Low
cufflinks 4.3        
cufflinks 4.503        
cufflinks 4.48        
cufflinks 3.553        
cufflinks 6.113        
cufflinks 4.416        

0 Strain