Gene : Sobic.003G297800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23115:SF14 - ELONGATION FACTOR FAMILY PROTEIN Genomic Order:  3139
Name:  ? Sobic.003G297800 Secondary Identifier:  ? PAC:37915260
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G297800 0.5kb upstream 0.5kb upstream 11659 true Chr03: 62950190-62961848 Sorghum bicolor
Sobic.003G297800 0.5kb upstream 0.5kb upstream 500 false Chr03: 62950190-62950689 Sorghum bicolor
Sobic.003G297800 0.5kb downstream 0.5kb downstream 11659 true Chr03: 62950690-62962348 Sorghum bicolor
Sobic.003G297800 0.5kb downstream 0.5kb downstream 500 false Chr03: 62961849-62962348 Sorghum bicolor
Sobic.003G297800 1.0kb upstream 1.0kb upstream 12159 true Chr03: 62949690-62961848 Sorghum bicolor
Sobic.003G297800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 62949690-62950689 Sorghum bicolor
Sobic.003G297800 1.0kb downstream 1.0kb downstream 12159 true Chr03: 62950690-62962848 Sorghum bicolor
Sobic.003G297800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 62961849-62962848 Sorghum bicolor
Sobic.003G297800 2.0kb upstream 2.0kb upstream 13159 true Chr03: 62948690-62961848 Sorghum bicolor
Sobic.003G297800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 62948690-62950689 Sorghum bicolor
Sobic.003G297800 2.0kb downstream 2.0kb downstream 13159 true Chr03: 62950690-62963848 Sorghum bicolor
Sobic.003G297800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 62961849-62963848 Sorghum bicolor
Sobic.003G297800 5.0kb upstream 5.0kb upstream 16159 true Chr03: 62945690-62961848 Sorghum bicolor
Sobic.003G297800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 62945690-62950689 Sorghum bicolor
Sobic.003G297800 5.0kb downstream 5.0kb downstream 16159 true Chr03: 62950690-62966848 Sorghum bicolor
Sobic.003G297800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 62961849-62966848 Sorghum bicolor
Sobic.003G297800 10.0kb upstream 10.0kb upstream 21159 true Chr03: 62940690-62961848 Sorghum bicolor
Sobic.003G297800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 62940690-62950689 Sorghum bicolor
Sobic.003G297800 10.0kb downstream 10.0kb downstream 21159 true Chr03: 62950690-62971848 Sorghum bicolor
Sobic.003G297800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 62961849-62971848 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178879 5267 Panicoideae View MSA
124579634 5269 Grass View MSA
122047839 5273 Angiosperm View MSA
121347547 5274 Embryophyte View MSA
123425076 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.54       High
cufflinks 0.244       Low
cufflinks 0.776        
cufflinks 1.737        
cufflinks 2.647        
cufflinks 1.236        
cufflinks 1.212        
cufflinks 0.269       Low
cufflinks 3.931        
cufflinks 4.842        
cufflinks 4.865        
cufflinks 2.998        
cufflinks 1.998        
cufflinks 3.897        
cufflinks 1.938        
cufflinks 0.551       Low
cufflinks 1.28        
cufflinks 1.497        
cufflinks 0.357       Low
cufflinks 1.05        
cufflinks 3.256        
cufflinks 7.563       High
cufflinks 5.235        
cufflinks 5.836       High
cufflinks 0.225       Low
cufflinks 0.333       Low
cufflinks 2.948        
cufflinks 3.797        
cufflinks 0.704        
cufflinks 3.029        

0 Strain