Gene : Sobic.003G297500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12630//PTHR12630:SF8 - N-LINKED OLIGOSACCHARIDE PROCESSING // SUBFAMILY NOT NAMED Genomic Order:  3136
Name:  ? Sobic.003G297500 Secondary Identifier:  ? PAC:37913026
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G297500 0.5kb upstream 0.5kb upstream 2016 true Chr03: 62934835-62936850 Sorghum bicolor
Sobic.003G297500 0.5kb upstream 0.5kb upstream 500 false Chr03: 62936351-62936850 Sorghum bicolor
Sobic.003G297500 0.5kb downstream 0.5kb downstream 2016 true Chr03: 62934335-62936350 Sorghum bicolor
Sobic.003G297500 0.5kb downstream 0.5kb downstream 500 false Chr03: 62934335-62934834 Sorghum bicolor
Sobic.003G297500 1.0kb upstream 1.0kb upstream 2516 true Chr03: 62934835-62937350 Sorghum bicolor
Sobic.003G297500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 62936351-62937350 Sorghum bicolor
Sobic.003G297500 1.0kb downstream 1.0kb downstream 2516 true Chr03: 62933835-62936350 Sorghum bicolor
Sobic.003G297500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 62933835-62934834 Sorghum bicolor
Sobic.003G297500 2.0kb upstream 2.0kb upstream 3516 true Chr03: 62934835-62938350 Sorghum bicolor
Sobic.003G297500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 62936351-62938350 Sorghum bicolor
Sobic.003G297500 2.0kb downstream 2.0kb downstream 3516 true Chr03: 62932835-62936350 Sorghum bicolor
Sobic.003G297500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 62932835-62934834 Sorghum bicolor
Sobic.003G297500 5.0kb upstream 5.0kb upstream 6516 true Chr03: 62934835-62941350 Sorghum bicolor
Sobic.003G297500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 62936351-62941350 Sorghum bicolor
Sobic.003G297500 5.0kb downstream 5.0kb downstream 6516 true Chr03: 62929835-62936350 Sorghum bicolor
Sobic.003G297500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 62929835-62934834 Sorghum bicolor
Sobic.003G297500 10.0kb upstream 10.0kb upstream 11516 true Chr03: 62934835-62946350 Sorghum bicolor
Sobic.003G297500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 62936351-62946350 Sorghum bicolor
Sobic.003G297500 10.0kb downstream 10.0kb downstream 11516 true Chr03: 62924835-62936350 Sorghum bicolor
Sobic.003G297500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 62924835-62934834 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184705 5267 Panicoideae View MSA
124569434 5269 Grass View MSA
122047076 5273 Angiosperm View MSA
121346791 5274 Embryophyte View MSA
123380446 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.462        
cufflinks 1.713       Low
cufflinks 3.84        
cufflinks 7.571        
cufflinks 7.685        
cufflinks 9.184        
cufflinks 4.804        
cufflinks 2.889       Low
cufflinks 17.959     High High
cufflinks 18.335     High High
cufflinks 4.575        
cufflinks 7.769        
cufflinks 12.657     High High
cufflinks 5.476        
cufflinks 9.055        
cufflinks 3.918        
cufflinks 4.95        
cufflinks 3.977        
cufflinks 4.444        
cufflinks 7.973        
cufflinks 10.383       High
cufflinks 5.571        
cufflinks 4.725        
cufflinks 4.392        
cufflinks 2.941       Low
cufflinks 1.759       Low
cufflinks 5.64        
cufflinks 1.285       Low
cufflinks 3.842        
cufflinks 10.003       High

0 Strain