Gene : Sobic.003G297400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11941//PTHR11941:SF94 - ENOYL-COA HYDRATASE-RELATED // 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 5 Genomic Order:  3135
Name:  ? Sobic.003G297400 Secondary Identifier:  ? PAC:37912719
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-7574 Sorghum bicolor pathologic  
Sbicolor VALDEG-PWY Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G297400 0.5kb upstream 0.5kb upstream 5070 true Chr03: 62928380-62933449 Sorghum bicolor
Sobic.003G297400 0.5kb upstream 0.5kb upstream 500 false Chr03: 62932950-62933449 Sorghum bicolor
Sobic.003G297400 0.5kb downstream 0.5kb downstream 5070 true Chr03: 62927880-62932949 Sorghum bicolor
Sobic.003G297400 0.5kb downstream 0.5kb downstream 500 false Chr03: 62927880-62928379 Sorghum bicolor
Sobic.003G297400 1.0kb upstream 1.0kb upstream 5570 true Chr03: 62928380-62933949 Sorghum bicolor
Sobic.003G297400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 62932950-62933949 Sorghum bicolor
Sobic.003G297400 1.0kb downstream 1.0kb downstream 5570 true Chr03: 62927380-62932949 Sorghum bicolor
Sobic.003G297400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 62927380-62928379 Sorghum bicolor
Sobic.003G297400 2.0kb upstream 2.0kb upstream 6570 true Chr03: 62928380-62934949 Sorghum bicolor
Sobic.003G297400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 62932950-62934949 Sorghum bicolor
Sobic.003G297400 2.0kb downstream 2.0kb downstream 6570 true Chr03: 62926380-62932949 Sorghum bicolor
Sobic.003G297400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 62926380-62928379 Sorghum bicolor
Sobic.003G297400 5.0kb upstream 5.0kb upstream 9570 true Chr03: 62928380-62937949 Sorghum bicolor
Sobic.003G297400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 62932950-62937949 Sorghum bicolor
Sobic.003G297400 5.0kb downstream 5.0kb downstream 9570 true Chr03: 62923380-62932949 Sorghum bicolor
Sobic.003G297400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 62923380-62928379 Sorghum bicolor
Sobic.003G297400 10.0kb upstream 10.0kb upstream 14570 true Chr03: 62928380-62942949 Sorghum bicolor
Sobic.003G297400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 62932950-62942949 Sorghum bicolor
Sobic.003G297400 10.0kb downstream 10.0kb downstream 14570 true Chr03: 62918380-62932949 Sorghum bicolor
Sobic.003G297400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 62918380-62928379 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193166 5267 Panicoideae View MSA
124576820 5269 Grass View MSA
122044821 5273 Angiosperm View MSA
121345696 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.603     High  
cufflinks 2.667       Low
cufflinks 2.674       Low
cufflinks 3.711       Low
cufflinks 7.099        
cufflinks 2.269       Low
cufflinks 13.208     High  
cufflinks 10.474     High  
cufflinks 5.86        
cufflinks 6.595        
cufflinks 21.073     High  
cufflinks 29.583     High High
cufflinks 24.623     High  
cufflinks 31.205     High High
cufflinks 9.784        
cufflinks 3.676       Low
cufflinks 15.212     High  
cufflinks 15.501     High  
cufflinks 3.643       Low
cufflinks 15.748     High  
cufflinks 4.011       Low
cufflinks 20.909     High  
cufflinks 33.495     High High
cufflinks 30.133     High High
cufflinks 2.08       Low
cufflinks 2.45       Low
cufflinks 26.577     High High
cufflinks 1.614       Low
cufflinks 18.761     High  
cufflinks 12.685     High  

0 Strain