Gene : Sobic.003G298100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR33873:SF1 - TRANSCRIPTION FACTOR VOZ1 Genomic Order:  3142
Name:  ? Sobic.003G298100 Secondary Identifier:  ? PAC:37916457
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G298100 0.5kb upstream 0.5kb upstream 4901 true Chr03: 62971045-62975945 Sorghum bicolor
Sobic.003G298100 0.5kb upstream 0.5kb upstream 500 false Chr03: 62975446-62975945 Sorghum bicolor
Sobic.003G298100 0.5kb downstream 0.5kb downstream 4901 true Chr03: 62970545-62975445 Sorghum bicolor
Sobic.003G298100 0.5kb downstream 0.5kb downstream 500 false Chr03: 62970545-62971044 Sorghum bicolor
Sobic.003G298100 1.0kb upstream 1.0kb upstream 5401 true Chr03: 62971045-62976445 Sorghum bicolor
Sobic.003G298100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 62975446-62976445 Sorghum bicolor
Sobic.003G298100 1.0kb downstream 1.0kb downstream 5401 true Chr03: 62970045-62975445 Sorghum bicolor
Sobic.003G298100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 62970045-62971044 Sorghum bicolor
Sobic.003G298100 2.0kb upstream 2.0kb upstream 6401 true Chr03: 62971045-62977445 Sorghum bicolor
Sobic.003G298100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 62975446-62977445 Sorghum bicolor
Sobic.003G298100 2.0kb downstream 2.0kb downstream 6401 true Chr03: 62969045-62975445 Sorghum bicolor
Sobic.003G298100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 62969045-62971044 Sorghum bicolor
Sobic.003G298100 5.0kb upstream 5.0kb upstream 9401 true Chr03: 62971045-62980445 Sorghum bicolor
Sobic.003G298100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 62975446-62980445 Sorghum bicolor
Sobic.003G298100 5.0kb downstream 5.0kb downstream 9401 true Chr03: 62966045-62975445 Sorghum bicolor
Sobic.003G298100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 62966045-62971044 Sorghum bicolor
Sobic.003G298100 10.0kb upstream 10.0kb upstream 14401 true Chr03: 62971045-62985445 Sorghum bicolor
Sobic.003G298100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 62975446-62985445 Sorghum bicolor
Sobic.003G298100 10.0kb downstream 10.0kb downstream 14401 true Chr03: 62961045-62975445 Sorghum bicolor
Sobic.003G298100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 62961045-62971044 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198488 5267 Panicoideae View MSA
124575606 5269 Grass View MSA
122043421 5273 Angiosperm View MSA
121348934 5274 Embryophyte View MSA
123381085 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.435        
cufflinks 5.048        
cufflinks 6.84        
cufflinks 5.875        
cufflinks 9.754       High
cufflinks 9.932       High
cufflinks 5.874        
cufflinks 3.792       Low
cufflinks 8.881        
cufflinks 12.33     High High
cufflinks 5.135        
cufflinks 5.619        
cufflinks 8.639        
cufflinks 5.009        
cufflinks 9.389        
cufflinks 9.39        
cufflinks 5.909        
cufflinks 7.383        
cufflinks 6.51        
cufflinks 6.957        
cufflinks 14.976     High High
cufflinks 4.502        
cufflinks 4.486        
cufflinks 4.29        
cufflinks 5.976        
cufflinks 5.231        
cufflinks 3.866       Low
cufflinks 3.8       Low
cufflinks 3.741       Low
cufflinks 7.378        

0 Strain