Gene : Sobic.003G300600 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR10217//PTHR10217:SF520 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // SUBFAMILY NOT NAMED Genomic Order:  3167
Name:  ? Sobic.003G300600 Secondary Identifier:  ? PAC:37917604
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G300600 0.5kb upstream 0.5kb upstream 3500 true Chr03: 63160825-63164324 Sorghum bicolor
Sobic.003G300600 0.5kb upstream 0.5kb upstream 500 false Chr03: 63160825-63161324 Sorghum bicolor
Sobic.003G300600 0.5kb downstream 0.5kb downstream 3500 true Chr03: 63161325-63164824 Sorghum bicolor
Sobic.003G300600 0.5kb downstream 0.5kb downstream 500 false Chr03: 63164325-63164824 Sorghum bicolor
Sobic.003G300600 1.0kb upstream 1.0kb upstream 4000 true Chr03: 63160325-63164324 Sorghum bicolor
Sobic.003G300600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 63160325-63161324 Sorghum bicolor
Sobic.003G300600 1.0kb downstream 1.0kb downstream 4000 true Chr03: 63161325-63165324 Sorghum bicolor
Sobic.003G300600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 63164325-63165324 Sorghum bicolor
Sobic.003G300600 2.0kb upstream 2.0kb upstream 5000 true Chr03: 63159325-63164324 Sorghum bicolor
Sobic.003G300600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 63159325-63161324 Sorghum bicolor
Sobic.003G300600 2.0kb downstream 2.0kb downstream 5000 true Chr03: 63161325-63166324 Sorghum bicolor
Sobic.003G300600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 63164325-63166324 Sorghum bicolor
Sobic.003G300600 5.0kb upstream 5.0kb upstream 8000 true Chr03: 63156325-63164324 Sorghum bicolor
Sobic.003G300600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 63156325-63161324 Sorghum bicolor
Sobic.003G300600 5.0kb downstream 5.0kb downstream 8000 true Chr03: 63161325-63169324 Sorghum bicolor
Sobic.003G300600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 63164325-63169324 Sorghum bicolor
Sobic.003G300600 10.0kb upstream 10.0kb upstream 13000 true Chr03: 63151325-63164324 Sorghum bicolor
Sobic.003G300600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 63151325-63161324 Sorghum bicolor
Sobic.003G300600 10.0kb downstream 10.0kb downstream 13000 true Chr03: 63161325-63174324 Sorghum bicolor
Sobic.003G300600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 63164325-63174324 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179831 5267 Panicoideae View MSA
124572133 5269 Grass View MSA
122043816 5273 Angiosperm View MSA
121310193 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.105        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low Low
cufflinks 0.499        
cufflinks 0.296        
cufflinks 0.04     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 10.375       High
cufflinks 16.5     High High
cufflinks 1.608        
cufflinks 0.389        
cufflinks 10.925       High
cufflinks 0.732        
cufflinks 1.52        
cufflinks 0.008     Low Low
cufflinks 0.016     Low Low
cufflinks 0.023     Low Low
cufflinks 0.031     Low  
cufflinks 0.053     Low  
cufflinks 0.188        
cufflinks 0.183        
cufflinks 0.406        
cufflinks 0.431        
cufflinks 0.01     Low Low
cufflinks 0.005     Low Low
cufflinks 0.534        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.309        

0 Strain