Gene : Sobic.003G302900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13464 - TRANSCRIPTIONAL REGULATOR PROTEIN HCNGP Genomic Order:  3193
Name:  ? Sobic.003G302900 Secondary Identifier:  ? PAC:37917099
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G302900 0.5kb upstream 0.5kb upstream 7034 true Chr03: 63354829-63361862 Sorghum bicolor
Sobic.003G302900 0.5kb upstream 0.5kb upstream 500 false Chr03: 63354829-63355328 Sorghum bicolor
Sobic.003G302900 0.5kb downstream 0.5kb downstream 7034 true Chr03: 63355329-63362362 Sorghum bicolor
Sobic.003G302900 0.5kb downstream 0.5kb downstream 500 false Chr03: 63361863-63362362 Sorghum bicolor
Sobic.003G302900 1.0kb upstream 1.0kb upstream 7534 true Chr03: 63354329-63361862 Sorghum bicolor
Sobic.003G302900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 63354329-63355328 Sorghum bicolor
Sobic.003G302900 1.0kb downstream 1.0kb downstream 7534 true Chr03: 63355329-63362862 Sorghum bicolor
Sobic.003G302900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 63361863-63362862 Sorghum bicolor
Sobic.003G302900 2.0kb upstream 2.0kb upstream 8534 true Chr03: 63353329-63361862 Sorghum bicolor
Sobic.003G302900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 63353329-63355328 Sorghum bicolor
Sobic.003G302900 2.0kb downstream 2.0kb downstream 8534 true Chr03: 63355329-63363862 Sorghum bicolor
Sobic.003G302900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 63361863-63363862 Sorghum bicolor
Sobic.003G302900 5.0kb upstream 5.0kb upstream 11534 true Chr03: 63350329-63361862 Sorghum bicolor
Sobic.003G302900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 63350329-63355328 Sorghum bicolor
Sobic.003G302900 5.0kb downstream 5.0kb downstream 11534 true Chr03: 63355329-63366862 Sorghum bicolor
Sobic.003G302900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 63361863-63366862 Sorghum bicolor
Sobic.003G302900 10.0kb upstream 10.0kb upstream 16534 true Chr03: 63345329-63361862 Sorghum bicolor
Sobic.003G302900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 63345329-63355328 Sorghum bicolor
Sobic.003G302900 10.0kb downstream 10.0kb downstream 16534 true Chr03: 63355329-63371862 Sorghum bicolor
Sobic.003G302900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 63361863-63371862 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183194 5267 Panicoideae View MSA
124589271 5269 Grass View MSA
122042858 5273 Angiosperm View MSA
123429181 5275 Viridiplantae View MSA
121344834 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.074        
cufflinks 3.614        
cufflinks 4.758        
cufflinks 7.133       High
cufflinks 4.732        
cufflinks 7.141       High
cufflinks 3.55       Low
cufflinks 2.811       Low
cufflinks 9.469       High
cufflinks 9.57       High
cufflinks 3.923        
cufflinks 4.345        
cufflinks 7.535       High
cufflinks 4.055        
cufflinks 4.618        
cufflinks 4.847        
cufflinks 3.884        
cufflinks 3.634        
cufflinks 5.616        
cufflinks 4.63        
cufflinks 7.015       High
cufflinks 4.263        
cufflinks 4.353        
cufflinks 3.851        
cufflinks 4.983        
cufflinks 3.063       Low
cufflinks 4.535        
cufflinks 11.568     High High
cufflinks 3.254       Low
cufflinks 4.65        

0 Strain