Gene : Sobic.003G303100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11886//PTHR11886:SF47 - DYNEIN LIGHT CHAIN // SUBFAMILY NOT NAMED Genomic Order:  3195
Name:  ? Sobic.003G303100 Secondary Identifier:  ? PAC:37913669
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G303100 0.5kb upstream 0.5kb upstream 2450 true Chr03: 63372259-63374708 Sorghum bicolor
Sobic.003G303100 0.5kb upstream 0.5kb upstream 500 false Chr03: 63372259-63372758 Sorghum bicolor
Sobic.003G303100 0.5kb downstream 0.5kb downstream 2450 true Chr03: 63372759-63375208 Sorghum bicolor
Sobic.003G303100 0.5kb downstream 0.5kb downstream 500 false Chr03: 63374709-63375208 Sorghum bicolor
Sobic.003G303100 1.0kb upstream 1.0kb upstream 2950 true Chr03: 63371759-63374708 Sorghum bicolor
Sobic.003G303100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 63371759-63372758 Sorghum bicolor
Sobic.003G303100 1.0kb downstream 1.0kb downstream 2950 true Chr03: 63372759-63375708 Sorghum bicolor
Sobic.003G303100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 63374709-63375708 Sorghum bicolor
Sobic.003G303100 2.0kb upstream 2.0kb upstream 3950 true Chr03: 63370759-63374708 Sorghum bicolor
Sobic.003G303100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 63370759-63372758 Sorghum bicolor
Sobic.003G303100 2.0kb downstream 2.0kb downstream 3950 true Chr03: 63372759-63376708 Sorghum bicolor
Sobic.003G303100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 63374709-63376708 Sorghum bicolor
Sobic.003G303100 5.0kb upstream 5.0kb upstream 6950 true Chr03: 63367759-63374708 Sorghum bicolor
Sobic.003G303100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 63367759-63372758 Sorghum bicolor
Sobic.003G303100 5.0kb downstream 5.0kb downstream 6950 true Chr03: 63372759-63379708 Sorghum bicolor
Sobic.003G303100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 63374709-63379708 Sorghum bicolor
Sobic.003G303100 10.0kb upstream 10.0kb upstream 11950 true Chr03: 63362759-63374708 Sorghum bicolor
Sobic.003G303100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 63362759-63372758 Sorghum bicolor
Sobic.003G303100 10.0kb downstream 10.0kb downstream 11950 true Chr03: 63372759-63384708 Sorghum bicolor
Sobic.003G303100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 63374709-63384708 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184956 5267 Panicoideae View MSA
124584496 5269 Grass View MSA
122043951 5273 Angiosperm View MSA
121349084 5274 Embryophyte View MSA
123427557 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.499        
cufflinks 3.794        
cufflinks 9.215       High
cufflinks 14.636     High High
cufflinks 0.601        
cufflinks 3.787        
cufflinks 0.405        
cufflinks 0.237       Low
cufflinks 0.124       Low
cufflinks 0.194       Low
cufflinks 20.08     High High
cufflinks 1.039        
cufflinks 0.09       Low
cufflinks 2.745        
cufflinks 1.764        
cufflinks 4.945        
cufflinks 0.461        
cufflinks 0.514        
cufflinks 3.665        
cufflinks 0.482        
cufflinks 0.081     Low Low
cufflinks 14.28     High High
cufflinks 0.814        
cufflinks 0.56        
cufflinks 6.403        
cufflinks 1.794        
cufflinks 27.47     High High
cufflinks 0.572        
cufflinks 0.256       Low
cufflinks 0.556        

0 Strain