Gene : Sobic.003G308000 S. bicolor v3.1.1
Defline:  (1 of 1) K15902 - EKC/KEOPS complex subunit PCC1/LAGE3 (PCC1, LAGE3) Genomic Order:  3245
Name:  ? Sobic.003G308000 Secondary Identifier:  ? PAC:37915573
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G308000 0.5kb upstream 0.5kb upstream 2377 true Chr03: 63667632-63670008 Sorghum bicolor
Sobic.003G308000 0.5kb upstream 0.5kb upstream 500 false Chr03: 63669509-63670008 Sorghum bicolor
Sobic.003G308000 0.5kb downstream 0.5kb downstream 2377 true Chr03: 63667132-63669508 Sorghum bicolor
Sobic.003G308000 0.5kb downstream 0.5kb downstream 500 false Chr03: 63667132-63667631 Sorghum bicolor
Sobic.003G308000 1.0kb upstream 1.0kb upstream 2877 true Chr03: 63667632-63670508 Sorghum bicolor
Sobic.003G308000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 63669509-63670508 Sorghum bicolor
Sobic.003G308000 1.0kb downstream 1.0kb downstream 2877 true Chr03: 63666632-63669508 Sorghum bicolor
Sobic.003G308000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 63666632-63667631 Sorghum bicolor
Sobic.003G308000 2.0kb upstream 2.0kb upstream 3877 true Chr03: 63667632-63671508 Sorghum bicolor
Sobic.003G308000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 63669509-63671508 Sorghum bicolor
Sobic.003G308000 2.0kb downstream 2.0kb downstream 3877 true Chr03: 63665632-63669508 Sorghum bicolor
Sobic.003G308000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 63665632-63667631 Sorghum bicolor
Sobic.003G308000 5.0kb upstream 5.0kb upstream 6877 true Chr03: 63667632-63674508 Sorghum bicolor
Sobic.003G308000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 63669509-63674508 Sorghum bicolor
Sobic.003G308000 5.0kb downstream 5.0kb downstream 6877 true Chr03: 63662632-63669508 Sorghum bicolor
Sobic.003G308000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 63662632-63667631 Sorghum bicolor
Sobic.003G308000 10.0kb upstream 10.0kb upstream 11877 true Chr03: 63667632-63679508 Sorghum bicolor
Sobic.003G308000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 63669509-63679508 Sorghum bicolor
Sobic.003G308000 10.0kb downstream 10.0kb downstream 11877 true Chr03: 63657632-63669508 Sorghum bicolor
Sobic.003G308000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 63657632-63667631 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194825 5267 Panicoideae View MSA
124580259 5269 Grass View MSA
122043690 5273 Angiosperm View MSA
121347192 5274 Embryophyte View MSA
123380508 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.48     High High
cufflinks 0.752       Low
cufflinks 1.082        
cufflinks 2.221        
cufflinks 1.417        
cufflinks 2.691        
cufflinks 1.766        
cufflinks 0.992       Low
cufflinks 1.558        
cufflinks 1.565        
cufflinks 2.448        
cufflinks 1.672        
cufflinks 0.905       Low
cufflinks 1.715        
cufflinks 1.912        
cufflinks 0.817       Low
cufflinks 2.128        
cufflinks 2.07        
cufflinks 0.744       Low
cufflinks 1.867        
cufflinks 2.177        
cufflinks 3.544       High
cufflinks 2.085        
cufflinks 2.685        
cufflinks 0.667       Low
cufflinks 0.771       Low
cufflinks 1.589        
cufflinks 1.219        
cufflinks 1.817        
cufflinks 2.689        

0 Strain