Gene : Sobic.003G310400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11474//PTHR11474:SF35 - TYROSINASE // SUBFAMILY NOT NAMED Genomic Order:  3266
Name:  ? Sobic.003G310400 Secondary Identifier:  ? PAC:37916764
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6752 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G310400 0.5kb upstream 0.5kb upstream 4664 true Chr03: 63860940-63865603 Sorghum bicolor
Sobic.003G310400 0.5kb upstream 0.5kb upstream 500 false Chr03: 63865104-63865603 Sorghum bicolor
Sobic.003G310400 0.5kb downstream 0.5kb downstream 4664 true Chr03: 63860440-63865103 Sorghum bicolor
Sobic.003G310400 0.5kb downstream 0.5kb downstream 500 false Chr03: 63860440-63860939 Sorghum bicolor
Sobic.003G310400 1.0kb upstream 1.0kb upstream 5164 true Chr03: 63860940-63866103 Sorghum bicolor
Sobic.003G310400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 63865104-63866103 Sorghum bicolor
Sobic.003G310400 1.0kb downstream 1.0kb downstream 5164 true Chr03: 63859940-63865103 Sorghum bicolor
Sobic.003G310400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 63859940-63860939 Sorghum bicolor
Sobic.003G310400 2.0kb upstream 2.0kb upstream 6164 true Chr03: 63860940-63867103 Sorghum bicolor
Sobic.003G310400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 63865104-63867103 Sorghum bicolor
Sobic.003G310400 2.0kb downstream 2.0kb downstream 6164 true Chr03: 63858940-63865103 Sorghum bicolor
Sobic.003G310400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 63858940-63860939 Sorghum bicolor
Sobic.003G310400 5.0kb upstream 5.0kb upstream 9164 true Chr03: 63860940-63870103 Sorghum bicolor
Sobic.003G310400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 63865104-63870103 Sorghum bicolor
Sobic.003G310400 5.0kb downstream 5.0kb downstream 9164 true Chr03: 63855940-63865103 Sorghum bicolor
Sobic.003G310400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 63855940-63860939 Sorghum bicolor
Sobic.003G310400 10.0kb upstream 10.0kb upstream 14164 true Chr03: 63860940-63875103 Sorghum bicolor
Sobic.003G310400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 63865104-63875103 Sorghum bicolor
Sobic.003G310400 10.0kb downstream 10.0kb downstream 14164 true Chr03: 63850940-63865103 Sorghum bicolor
Sobic.003G310400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 63850940-63860939 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994851 5273 Angiosperm View MSA
122197611 5267 Panicoideae View MSA
124585862 5269 Grass View MSA
121350975 5274 Embryophyte View MSA
123428097 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.171       High
cufflinks 0.479        
cufflinks 0.081        
cufflinks 0.003     Low Low
cufflinks 0.274        
cufflinks 6.436       High
cufflinks 4.989       High
cufflinks 0.002     Low Low
cufflinks 0.002     Low Low
cufflinks 0.016     Low  
cufflinks 0.007     Low  
cufflinks 0.007     Low  
cufflinks 0.007     Low  
cufflinks 0.042     Low  
cufflinks 2.555       High
cufflinks 5.301       High
cufflinks 4.487       High
cufflinks 1.959       High
cufflinks 2.259       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.95        
cufflinks 3.058       High
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.761        
cufflinks 0.017     Low  

0 Strain