Gene : Sobic.003G375500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR15856//PTHR15856:SF29 - PHD FINGER PROTEIN 20-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3949
Name:  ? Sobic.003G375500 Secondary Identifier:  ? PAC:37912869
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G375500 0.5kb upstream 0.5kb upstream 4096 true Chr03: 69014875-69018970 Sorghum bicolor
Sobic.003G375500 0.5kb upstream 0.5kb upstream 500 false Chr03: 69014875-69015374 Sorghum bicolor
Sobic.003G375500 0.5kb downstream 0.5kb downstream 4096 true Chr03: 69015375-69019470 Sorghum bicolor
Sobic.003G375500 0.5kb downstream 0.5kb downstream 500 false Chr03: 69018971-69019470 Sorghum bicolor
Sobic.003G375500 1.0kb upstream 1.0kb upstream 4596 true Chr03: 69014375-69018970 Sorghum bicolor
Sobic.003G375500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 69014375-69015374 Sorghum bicolor
Sobic.003G375500 1.0kb downstream 1.0kb downstream 4596 true Chr03: 69015375-69019970 Sorghum bicolor
Sobic.003G375500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 69018971-69019970 Sorghum bicolor
Sobic.003G375500 2.0kb upstream 2.0kb upstream 5596 true Chr03: 69013375-69018970 Sorghum bicolor
Sobic.003G375500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 69013375-69015374 Sorghum bicolor
Sobic.003G375500 2.0kb downstream 2.0kb downstream 5596 true Chr03: 69015375-69020970 Sorghum bicolor
Sobic.003G375500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 69018971-69020970 Sorghum bicolor
Sobic.003G375500 5.0kb upstream 5.0kb upstream 8596 true Chr03: 69010375-69018970 Sorghum bicolor
Sobic.003G375500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 69010375-69015374 Sorghum bicolor
Sobic.003G375500 5.0kb downstream 5.0kb downstream 8596 true Chr03: 69015375-69023970 Sorghum bicolor
Sobic.003G375500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 69018971-69023970 Sorghum bicolor
Sobic.003G375500 10.0kb upstream 10.0kb upstream 13596 true Chr03: 69005375-69018970 Sorghum bicolor
Sobic.003G375500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 69005375-69015374 Sorghum bicolor
Sobic.003G375500 10.0kb downstream 10.0kb downstream 13596 true Chr03: 69015375-69028970 Sorghum bicolor
Sobic.003G375500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 69018971-69028970 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181732 5267 Panicoideae View MSA
124569000 5269 Grass View MSA
122047427 5273 Angiosperm View MSA
121310739 5274 Embryophyte View MSA
123348151 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.872       Low
cufflinks 5.408        
cufflinks 4.447        
cufflinks 7.122        
cufflinks 4.484        
cufflinks 8.214        
cufflinks 6.962        
cufflinks 3.398       Low
cufflinks 10.517       High
cufflinks 11.6       High
cufflinks 5.224        
cufflinks 8.335        
cufflinks 11.018       High
cufflinks 4.303        
cufflinks 12.707     High High
cufflinks 7.622        
cufflinks 6.825        
cufflinks 7.166        
cufflinks 5.568        
cufflinks 8.487        
cufflinks 13.052       High
cufflinks 4.977        
cufflinks 5.741        
cufflinks 5.477        
cufflinks 8.576     High  
cufflinks 3.385       Low
cufflinks 6.044        
cufflinks 14.218     High High
cufflinks 4.849        
cufflinks 14.215     High High

0 Strain