Gene : Sobic.001G025400 S. bicolor v3.1.1
Defline:  (1 of 2) 3.7.1.5 - Acylpyruvate hydrolase Genomic Order:  255
Name:  ? Sobic.001G025400 Secondary Identifier:  ? PAC:37944532
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G025400 0.5kb upstream 0.5kb upstream 3834 true Chr01: 1981927-1985760 Sorghum bicolor
Sobic.001G025400 0.5kb upstream 0.5kb upstream 500 false Chr01: 1985261-1985760 Sorghum bicolor
Sobic.001G025400 0.5kb downstream 0.5kb downstream 3834 true Chr01: 1981427-1985260 Sorghum bicolor
Sobic.001G025400 0.5kb downstream 0.5kb downstream 500 false Chr01: 1981427-1981926 Sorghum bicolor
Sobic.001G025400 1.0kb upstream 1.0kb upstream 4334 true Chr01: 1981927-1986260 Sorghum bicolor
Sobic.001G025400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1985261-1986260 Sorghum bicolor
Sobic.001G025400 1.0kb downstream 1.0kb downstream 4334 true Chr01: 1980927-1985260 Sorghum bicolor
Sobic.001G025400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1980927-1981926 Sorghum bicolor
Sobic.001G025400 2.0kb upstream 2.0kb upstream 5334 true Chr01: 1981927-1987260 Sorghum bicolor
Sobic.001G025400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1985261-1987260 Sorghum bicolor
Sobic.001G025400 2.0kb downstream 2.0kb downstream 5334 true Chr01: 1979927-1985260 Sorghum bicolor
Sobic.001G025400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1979927-1981926 Sorghum bicolor
Sobic.001G025400 5.0kb upstream 5.0kb upstream 8334 true Chr01: 1981927-1990260 Sorghum bicolor
Sobic.001G025400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1985261-1990260 Sorghum bicolor
Sobic.001G025400 5.0kb downstream 5.0kb downstream 8334 true Chr01: 1976927-1985260 Sorghum bicolor
Sobic.001G025400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1976927-1981926 Sorghum bicolor
Sobic.001G025400 10.0kb upstream 10.0kb upstream 13334 true Chr01: 1981927-1995260 Sorghum bicolor
Sobic.001G025400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1985261-1995260 Sorghum bicolor
Sobic.001G025400 10.0kb downstream 10.0kb downstream 13334 true Chr01: 1971927-1985260 Sorghum bicolor
Sobic.001G025400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1971927-1981926 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192254 5267 Panicoideae View MSA
124571812 5269 Grass View MSA
122046320 5273 Angiosperm View MSA
121345844 5274 Embryophyte View MSA
123427728 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.482        
cufflinks 20.024     High High
cufflinks 15.779     High High
cufflinks 10.349        
cufflinks 3.372       Low
cufflinks 8.142        
cufflinks 15.47     High High
cufflinks 15.415     High High
cufflinks 3.706       Low
cufflinks 4.178       Low
cufflinks 7.293        
cufflinks 5.32        
cufflinks 4.896        
cufflinks 7.226        
cufflinks 7.642        
cufflinks 16.174     High High
cufflinks 13.851     High High
cufflinks 17.151     High High
cufflinks 8.752        
cufflinks 11.84        
cufflinks 3.606       Low
cufflinks 9.103        
cufflinks 6.181        
cufflinks 6.672        
cufflinks 12.878     High  
cufflinks 16.41     High High
cufflinks 5.392        
cufflinks 2.127       Low
cufflinks 17.766     High High
cufflinks 6.827        

0 Strain