Gene : Sobic.003G376800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23026 - NADPH NITROREDUCTASE Genomic Order:  3962
Name:  ? Sobic.003G376800 Secondary Identifier:  ? PAC:37915058
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G376800 0.5kb upstream 0.5kb upstream 5078 true Chr03: 69124316-69129393 Sorghum bicolor
Sobic.003G376800 0.5kb upstream 0.5kb upstream 500 false Chr03: 69124316-69124815 Sorghum bicolor
Sobic.003G376800 0.5kb downstream 0.5kb downstream 5078 true Chr03: 69124816-69129893 Sorghum bicolor
Sobic.003G376800 0.5kb downstream 0.5kb downstream 500 false Chr03: 69129394-69129893 Sorghum bicolor
Sobic.003G376800 1.0kb upstream 1.0kb upstream 5578 true Chr03: 69123816-69129393 Sorghum bicolor
Sobic.003G376800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 69123816-69124815 Sorghum bicolor
Sobic.003G376800 1.0kb downstream 1.0kb downstream 5578 true Chr03: 69124816-69130393 Sorghum bicolor
Sobic.003G376800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 69129394-69130393 Sorghum bicolor
Sobic.003G376800 2.0kb upstream 2.0kb upstream 6578 true Chr03: 69122816-69129393 Sorghum bicolor
Sobic.003G376800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 69122816-69124815 Sorghum bicolor
Sobic.003G376800 2.0kb downstream 2.0kb downstream 6578 true Chr03: 69124816-69131393 Sorghum bicolor
Sobic.003G376800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 69129394-69131393 Sorghum bicolor
Sobic.003G376800 5.0kb upstream 5.0kb upstream 9578 true Chr03: 69119816-69129393 Sorghum bicolor
Sobic.003G376800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 69119816-69124815 Sorghum bicolor
Sobic.003G376800 5.0kb downstream 5.0kb downstream 9578 true Chr03: 69124816-69134393 Sorghum bicolor
Sobic.003G376800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 69129394-69134393 Sorghum bicolor
Sobic.003G376800 10.0kb upstream 10.0kb upstream 14578 true Chr03: 69114816-69129393 Sorghum bicolor
Sobic.003G376800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 69114816-69124815 Sorghum bicolor
Sobic.003G376800 10.0kb downstream 10.0kb downstream 14578 true Chr03: 69124816-69139393 Sorghum bicolor
Sobic.003G376800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 69129394-69139393 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177129 5267 Panicoideae View MSA
124580783 5269 Grass View MSA
122045526 5273 Angiosperm View MSA
121345856 5274 Embryophyte View MSA
123380279 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.881        
cufflinks 0.44        
cufflinks 0.338       Low
cufflinks 0.787        
cufflinks 1.855       High
cufflinks 0.598        
cufflinks 0.62        
cufflinks 0.885        
cufflinks 3.175       High
cufflinks 2.396       High
cufflinks 0.162       Low
cufflinks 0.399       Low
cufflinks 0.845        
cufflinks 0.458        
cufflinks 0.689        
cufflinks 0.434        
cufflinks 0.858        
cufflinks 0.674        
cufflinks 0.667        
cufflinks 1.185        
cufflinks 1.943       High
cufflinks 0.326       Low
cufflinks 0.419        
cufflinks 0.438        
cufflinks 0.813        
cufflinks 1.158        
cufflinks 0.703        
cufflinks 8.431       High
cufflinks 0.762        
cufflinks 1.085        

0 Strain