Gene : Sobic.003G378400 S. bicolor v3.1.1
Defline:  (1 of 11) KOG2922 - Uncharacterized conserved protein Genomic Order:  3980
Name:  ? Sobic.003G378400 Secondary Identifier:  ? PAC:37913542
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G378400 0.5kb upstream 0.5kb upstream 5474 true Chr03: 69243151-69248624 Sorghum bicolor
Sobic.003G378400 0.5kb upstream 0.5kb upstream 500 false Chr03: 69243151-69243650 Sorghum bicolor
Sobic.003G378400 0.5kb downstream 0.5kb downstream 5474 true Chr03: 69243651-69249124 Sorghum bicolor
Sobic.003G378400 0.5kb downstream 0.5kb downstream 500 false Chr03: 69248625-69249124 Sorghum bicolor
Sobic.003G378400 1.0kb upstream 1.0kb upstream 5974 true Chr03: 69242651-69248624 Sorghum bicolor
Sobic.003G378400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 69242651-69243650 Sorghum bicolor
Sobic.003G378400 1.0kb downstream 1.0kb downstream 5974 true Chr03: 69243651-69249624 Sorghum bicolor
Sobic.003G378400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 69248625-69249624 Sorghum bicolor
Sobic.003G378400 2.0kb upstream 2.0kb upstream 6974 true Chr03: 69241651-69248624 Sorghum bicolor
Sobic.003G378400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 69241651-69243650 Sorghum bicolor
Sobic.003G378400 2.0kb downstream 2.0kb downstream 6974 true Chr03: 69243651-69250624 Sorghum bicolor
Sobic.003G378400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 69248625-69250624 Sorghum bicolor
Sobic.003G378400 5.0kb upstream 5.0kb upstream 9974 true Chr03: 69238651-69248624 Sorghum bicolor
Sobic.003G378400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 69238651-69243650 Sorghum bicolor
Sobic.003G378400 5.0kb downstream 5.0kb downstream 9974 true Chr03: 69243651-69253624 Sorghum bicolor
Sobic.003G378400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 69248625-69253624 Sorghum bicolor
Sobic.003G378400 10.0kb upstream 10.0kb upstream 14974 true Chr03: 69233651-69248624 Sorghum bicolor
Sobic.003G378400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 69233651-69243650 Sorghum bicolor
Sobic.003G378400 10.0kb downstream 10.0kb downstream 14974 true Chr03: 69243651-69258624 Sorghum bicolor
Sobic.003G378400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 69248625-69258624 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185411 5267 Panicoideae View MSA
124574188 5269 Grass View MSA
122049852 5273 Angiosperm View MSA
121350958 5274 Embryophyte View MSA
123428746 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.475        
cufflinks 0.474       Low
cufflinks 1.761       Low
cufflinks 3.4        
cufflinks 7.497        
cufflinks 3.9        
cufflinks 3.378        
cufflinks 2.488        
cufflinks 5.794        
cufflinks 5.546        
cufflinks 7.258        
cufflinks 7.539        
cufflinks 6.366        
cufflinks 7.389        
cufflinks 4.981        
cufflinks 1.415       Low
cufflinks 4.284        
cufflinks 3.506        
cufflinks 2.228        
cufflinks 5.355        
cufflinks 5.851        
cufflinks 7.604        
cufflinks 7.723        
cufflinks 7.052        
cufflinks 1.039       Low
cufflinks 0.572       Low
cufflinks 7.889        
cufflinks 2.082       Low
cufflinks 5.502        
cufflinks 5.644        

0 Strain