Gene : Sobic.001G019300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR32161//PTHR32161:SF8 - FAMILY NOT NAMED // PROTEIN TAG-10, ISOFORM A Genomic Order:  195
Name:  ? Sobic.001G019300 Secondary Identifier:  ? PAC:37938301
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G019300 0.5kb upstream 0.5kb upstream 3580 true Chr01: 1591351-1594930 Sorghum bicolor
Sobic.001G019300 0.5kb upstream 0.5kb upstream 500 false Chr01: 1594431-1594930 Sorghum bicolor
Sobic.001G019300 0.5kb downstream 0.5kb downstream 3580 true Chr01: 1590851-1594430 Sorghum bicolor
Sobic.001G019300 0.5kb downstream 0.5kb downstream 500 false Chr01: 1590851-1591350 Sorghum bicolor
Sobic.001G019300 1.0kb upstream 1.0kb upstream 4080 true Chr01: 1591351-1595430 Sorghum bicolor
Sobic.001G019300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1594431-1595430 Sorghum bicolor
Sobic.001G019300 1.0kb downstream 1.0kb downstream 4080 true Chr01: 1590351-1594430 Sorghum bicolor
Sobic.001G019300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1590351-1591350 Sorghum bicolor
Sobic.001G019300 2.0kb upstream 2.0kb upstream 5080 true Chr01: 1591351-1596430 Sorghum bicolor
Sobic.001G019300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1594431-1596430 Sorghum bicolor
Sobic.001G019300 2.0kb downstream 2.0kb downstream 5080 true Chr01: 1589351-1594430 Sorghum bicolor
Sobic.001G019300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1589351-1591350 Sorghum bicolor
Sobic.001G019300 5.0kb upstream 5.0kb upstream 8080 true Chr01: 1591351-1599430 Sorghum bicolor
Sobic.001G019300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1594431-1599430 Sorghum bicolor
Sobic.001G019300 5.0kb downstream 5.0kb downstream 8080 true Chr01: 1586351-1594430 Sorghum bicolor
Sobic.001G019300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1586351-1591350 Sorghum bicolor
Sobic.001G019300 10.0kb upstream 10.0kb upstream 13080 true Chr01: 1591351-1604430 Sorghum bicolor
Sobic.001G019300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1594431-1604430 Sorghum bicolor
Sobic.001G019300 10.0kb downstream 10.0kb downstream 13080 true Chr01: 1581351-1594430 Sorghum bicolor
Sobic.001G019300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1581351-1591350 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187216 5267 Panicoideae View MSA
124573836 5269 Grass View MSA
122050472 5273 Angiosperm View MSA
121347738 5274 Embryophyte View MSA
123424154 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.428        
cufflinks 9.051     High High
cufflinks 3.521        
cufflinks 6.384        
cufflinks 0.138       Low
cufflinks 9.484       High
cufflinks 9.248       High
cufflinks 11.75     High High
cufflinks 1.235        
cufflinks 0.457        
cufflinks 0.587        
cufflinks 0.848        
cufflinks 0.612        
cufflinks 0.815        
cufflinks 2.148        
cufflinks 24.069     High High
cufflinks 7.27       High
cufflinks 5.971        
cufflinks 19.298     High High
cufflinks 2.242        
cufflinks 0.322        
cufflinks 0.819        
cufflinks 0.293       Low
cufflinks 0.332        
cufflinks 13.701     High High
cufflinks 19.161     High High
cufflinks 0.636        
cufflinks 1.511        
cufflinks 3.432        
cufflinks 2.04        

0 Strain