Gene : Sobic.001G018800 S. bicolor v3.1.1
Defline:  (1 of 6) K02929 - large subunit ribosomal protein L44e (RP-L44e, RPL44) Genomic Order:  190
Name:  ? Sobic.001G018800 Secondary Identifier:  ? PAC:37937686
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G018800 0.5kb upstream 0.5kb upstream 1928 true Chr01: 1566576-1568503 Sorghum bicolor
Sobic.001G018800 0.5kb upstream 0.5kb upstream 500 false Chr01: 1566576-1567075 Sorghum bicolor
Sobic.001G018800 0.5kb downstream 0.5kb downstream 1928 true Chr01: 1567076-1569003 Sorghum bicolor
Sobic.001G018800 0.5kb downstream 0.5kb downstream 500 false Chr01: 1568504-1569003 Sorghum bicolor
Sobic.001G018800 1.0kb upstream 1.0kb upstream 2428 true Chr01: 1566076-1568503 Sorghum bicolor
Sobic.001G018800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1566076-1567075 Sorghum bicolor
Sobic.001G018800 1.0kb downstream 1.0kb downstream 2428 true Chr01: 1567076-1569503 Sorghum bicolor
Sobic.001G018800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1568504-1569503 Sorghum bicolor
Sobic.001G018800 2.0kb upstream 2.0kb upstream 3428 true Chr01: 1565076-1568503 Sorghum bicolor
Sobic.001G018800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1565076-1567075 Sorghum bicolor
Sobic.001G018800 2.0kb downstream 2.0kb downstream 3428 true Chr01: 1567076-1570503 Sorghum bicolor
Sobic.001G018800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1568504-1570503 Sorghum bicolor
Sobic.001G018800 5.0kb upstream 5.0kb upstream 6428 true Chr01: 1562076-1568503 Sorghum bicolor
Sobic.001G018800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1562076-1567075 Sorghum bicolor
Sobic.001G018800 5.0kb downstream 5.0kb downstream 6428 true Chr01: 1567076-1573503 Sorghum bicolor
Sobic.001G018800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1568504-1573503 Sorghum bicolor
Sobic.001G018800 10.0kb upstream 10.0kb upstream 11428 true Chr01: 1557076-1568503 Sorghum bicolor
Sobic.001G018800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1557076-1567075 Sorghum bicolor
Sobic.001G018800 10.0kb downstream 10.0kb downstream 11428 true Chr01: 1567076-1578503 Sorghum bicolor
Sobic.001G018800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1568504-1578503 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197862 5267 Panicoideae View MSA
124572857 5269 Grass View MSA
122044420 5273 Angiosperm View MSA
121349788 5274 Embryophyte View MSA
123423968 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 328.09     High High
cufflinks 8.293     High Low
cufflinks 43.983     High  
cufflinks 99.157     High  
cufflinks 71.379     High  
cufflinks 72.343     High  
cufflinks 63.589     High  
cufflinks 11.809     High Low
cufflinks 66.227     High  
cufflinks 70.677     High  
cufflinks 69.564     High  
cufflinks 73.694     High  
cufflinks 56.722     High  
cufflinks 86.766     High  
cufflinks 64.555     High  
cufflinks 30.622     High  
cufflinks 73.25     High  
cufflinks 72.398     High  
cufflinks 20.947     High Low
cufflinks 84.709     High  
cufflinks 92.829     High  
cufflinks 101.9     High  
cufflinks 93.745     High  
cufflinks 101.077     High  
cufflinks 19.1     High Low
cufflinks 5.584       Low
cufflinks 77.505     High  
cufflinks 148.365     High High
cufflinks 60.202     High  
cufflinks 85.401     High  

0 Strain