Gene : Sobic.001G015500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12428:SF18 - ALBINO3-LIKE PROTEIN 1, CHLOROPLASTIC Genomic Order:  153
Name:  ? Sobic.001G015500 Secondary Identifier:  ? PAC:37944573
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G015500 0.5kb upstream 0.5kb upstream 9406 true Chr01: 1371790-1381195 Sorghum bicolor
Sobic.001G015500 0.5kb upstream 0.5kb upstream 500 false Chr01: 1371790-1372289 Sorghum bicolor
Sobic.001G015500 0.5kb downstream 0.5kb downstream 9406 true Chr01: 1372290-1381695 Sorghum bicolor
Sobic.001G015500 0.5kb downstream 0.5kb downstream 500 false Chr01: 1381196-1381695 Sorghum bicolor
Sobic.001G015500 1.0kb upstream 1.0kb upstream 9906 true Chr01: 1371290-1381195 Sorghum bicolor
Sobic.001G015500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1371290-1372289 Sorghum bicolor
Sobic.001G015500 1.0kb downstream 1.0kb downstream 9906 true Chr01: 1372290-1382195 Sorghum bicolor
Sobic.001G015500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1381196-1382195 Sorghum bicolor
Sobic.001G015500 2.0kb upstream 2.0kb upstream 10906 true Chr01: 1370290-1381195 Sorghum bicolor
Sobic.001G015500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1370290-1372289 Sorghum bicolor
Sobic.001G015500 2.0kb downstream 2.0kb downstream 10906 true Chr01: 1372290-1383195 Sorghum bicolor
Sobic.001G015500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1381196-1383195 Sorghum bicolor
Sobic.001G015500 5.0kb upstream 5.0kb upstream 13906 true Chr01: 1367290-1381195 Sorghum bicolor
Sobic.001G015500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1367290-1372289 Sorghum bicolor
Sobic.001G015500 5.0kb downstream 5.0kb downstream 13906 true Chr01: 1372290-1386195 Sorghum bicolor
Sobic.001G015500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1381196-1386195 Sorghum bicolor
Sobic.001G015500 10.0kb upstream 10.0kb upstream 18906 true Chr01: 1362290-1381195 Sorghum bicolor
Sobic.001G015500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1362290-1372289 Sorghum bicolor
Sobic.001G015500 10.0kb downstream 10.0kb downstream 18906 true Chr01: 1372290-1391195 Sorghum bicolor
Sobic.001G015500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1381196-1391195 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181891 5267 Panicoideae View MSA
124574395 5269 Grass View MSA
122043512 5273 Angiosperm View MSA
121310140 5274 Embryophyte View MSA
123428331 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.899        
cufflinks 0.141       Low
cufflinks 0.459       Low
cufflinks 1.912        
cufflinks 1.29        
cufflinks 2.141        
cufflinks 0.639        
cufflinks 0.439       Low
cufflinks 2.075        
cufflinks 2.139        
cufflinks 1.603        
cufflinks 1.598        
cufflinks 1.164        
cufflinks 1.276        
cufflinks 1.147        
cufflinks 0.32       Low
cufflinks 0.677        
cufflinks 0.713        
cufflinks 0.589        
cufflinks 0.856        
cufflinks 1.628        
cufflinks 1.306        
cufflinks 1.323        
cufflinks 1.367        
cufflinks 0.454       Low
cufflinks 0.125       Low
cufflinks 1.365        
cufflinks 1.569        
cufflinks 0.907        
cufflinks 1.26        

0 Strain