Gene : Sobic.003G380200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12677:SF5 - TVP38/TMEM64 FAMILY MEMBRANE PROTEIN YDJX Genomic Order:  3999
Name:  ? Sobic.003G380200 Secondary Identifier:  ? PAC:37914436
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G380200 0.5kb upstream 0.5kb upstream 4008 true Chr03: 69396902-69400909 Sorghum bicolor
Sobic.003G380200 0.5kb upstream 0.5kb upstream 500 false Chr03: 69400410-69400909 Sorghum bicolor
Sobic.003G380200 0.5kb downstream 0.5kb downstream 4008 true Chr03: 69396402-69400409 Sorghum bicolor
Sobic.003G380200 0.5kb downstream 0.5kb downstream 500 false Chr03: 69396402-69396901 Sorghum bicolor
Sobic.003G380200 1.0kb upstream 1.0kb upstream 4508 true Chr03: 69396902-69401409 Sorghum bicolor
Sobic.003G380200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 69400410-69401409 Sorghum bicolor
Sobic.003G380200 1.0kb downstream 1.0kb downstream 4508 true Chr03: 69395902-69400409 Sorghum bicolor
Sobic.003G380200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 69395902-69396901 Sorghum bicolor
Sobic.003G380200 2.0kb upstream 2.0kb upstream 5508 true Chr03: 69396902-69402409 Sorghum bicolor
Sobic.003G380200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 69400410-69402409 Sorghum bicolor
Sobic.003G380200 2.0kb downstream 2.0kb downstream 5508 true Chr03: 69394902-69400409 Sorghum bicolor
Sobic.003G380200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 69394902-69396901 Sorghum bicolor
Sobic.003G380200 5.0kb upstream 5.0kb upstream 8508 true Chr03: 69396902-69405409 Sorghum bicolor
Sobic.003G380200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 69400410-69405409 Sorghum bicolor
Sobic.003G380200 5.0kb downstream 5.0kb downstream 8508 true Chr03: 69391902-69400409 Sorghum bicolor
Sobic.003G380200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 69391902-69396901 Sorghum bicolor
Sobic.003G380200 10.0kb upstream 10.0kb upstream 13508 true Chr03: 69396902-69410409 Sorghum bicolor
Sobic.003G380200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 69400410-69410409 Sorghum bicolor
Sobic.003G380200 10.0kb downstream 10.0kb downstream 13508 true Chr03: 69386902-69400409 Sorghum bicolor
Sobic.003G380200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 69386902-69396901 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191381 5267 Panicoideae View MSA
124578712 5269 Grass View MSA
122045988 5273 Angiosperm View MSA
121348100 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.925        
cufflinks 121.437     High High
cufflinks 25.11     High  
cufflinks 14.063     High  
cufflinks 3.665        
cufflinks 16.277     High  
cufflinks 38.243     High High
cufflinks 33.847     High High
cufflinks 7.131        
cufflinks 7.071        
cufflinks 2.964        
cufflinks 1.853       Low
cufflinks 5.525        
cufflinks 1.462       Low
cufflinks 6.969        
cufflinks 38.471     High High
cufflinks 40.313     High High
cufflinks 38.663     High High
cufflinks 17.833     High  
cufflinks 18.806     High  
cufflinks 2.496        
cufflinks 1.783       Low
cufflinks 2.587        
cufflinks 2.509        
cufflinks 91.265     High High
cufflinks 85.176     High High
cufflinks 1.856       Low
cufflinks 8.063        
cufflinks 21.779     High  
cufflinks 5.572        

0 Strain