Gene : Sobic.003G381200 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11208//PTHR11208:SF60 - RNA-BINDING PROTEIN RELATED // SUBFAMILY NOT NAMED Genomic Order:  4009
Name:  ? Sobic.003G381200 Secondary Identifier:  ? PAC:37914100
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G381200 0.5kb upstream 0.5kb upstream 5130 true Chr03: 69478799-69483928 Sorghum bicolor
Sobic.003G381200 0.5kb upstream 0.5kb upstream 500 false Chr03: 69478799-69479298 Sorghum bicolor
Sobic.003G381200 0.5kb downstream 0.5kb downstream 5130 true Chr03: 69479299-69484428 Sorghum bicolor
Sobic.003G381200 0.5kb downstream 0.5kb downstream 500 false Chr03: 69483929-69484428 Sorghum bicolor
Sobic.003G381200 1.0kb upstream 1.0kb upstream 5630 true Chr03: 69478299-69483928 Sorghum bicolor
Sobic.003G381200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 69478299-69479298 Sorghum bicolor
Sobic.003G381200 1.0kb downstream 1.0kb downstream 5630 true Chr03: 69479299-69484928 Sorghum bicolor
Sobic.003G381200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 69483929-69484928 Sorghum bicolor
Sobic.003G381200 2.0kb upstream 2.0kb upstream 6630 true Chr03: 69477299-69483928 Sorghum bicolor
Sobic.003G381200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 69477299-69479298 Sorghum bicolor
Sobic.003G381200 2.0kb downstream 2.0kb downstream 6630 true Chr03: 69479299-69485928 Sorghum bicolor
Sobic.003G381200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 69483929-69485928 Sorghum bicolor
Sobic.003G381200 5.0kb upstream 5.0kb upstream 9630 true Chr03: 69474299-69483928 Sorghum bicolor
Sobic.003G381200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 69474299-69479298 Sorghum bicolor
Sobic.003G381200 5.0kb downstream 5.0kb downstream 9630 true Chr03: 69479299-69488928 Sorghum bicolor
Sobic.003G381200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 69483929-69488928 Sorghum bicolor
Sobic.003G381200 10.0kb upstream 10.0kb upstream 14630 true Chr03: 69469299-69483928 Sorghum bicolor
Sobic.003G381200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 69469299-69479298 Sorghum bicolor
Sobic.003G381200 10.0kb downstream 10.0kb downstream 14630 true Chr03: 69479299-69493928 Sorghum bicolor
Sobic.003G381200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 69483929-69493928 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191095 5267 Panicoideae View MSA
124571010 5269 Grass View MSA
122041974 5273 Angiosperm View MSA
121350686 5274 Embryophyte View MSA
123426021 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.95     High  
cufflinks 10.324     High Low
cufflinks 15.785     High  
cufflinks 27.737     High  
cufflinks 21.571     High  
cufflinks 30.679     High  
cufflinks 21.086     High  
cufflinks 16.045     High  
cufflinks 41.819     High High
cufflinks 42.853     High High
cufflinks 35.004     High  
cufflinks 47.401     High High
cufflinks 32.331     High  
cufflinks 34.859     High  
cufflinks 15.212     High  
cufflinks 20.293     High  
cufflinks 25.215     High  
cufflinks 19.355     High  
cufflinks 26.347     High  
cufflinks 33.243     High  
cufflinks 22.846     High  
cufflinks 30.927     High  
cufflinks 39.461     High High
cufflinks 37.972     High  
cufflinks 22.478     High  
cufflinks 11.276     High Low
cufflinks 28.369     High  
cufflinks 2.253       Low
cufflinks 17.722     High  
cufflinks 14.994     High  

0 Strain