Gene : Sobic.001G013500 S. bicolor v3.1.1
Defline:  (1 of 3) K03016 - DNA-directed RNA polymerases I, II, and III subunit RPABC3 (RPB8, POLR2H) Genomic Order:  133
Name:  ? Sobic.001G013500 Secondary Identifier:  ? PAC:37944972
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G013500 0.5kb upstream 0.5kb upstream 3242 true Chr01: 1246783-1250024 Sorghum bicolor
Sobic.001G013500 0.5kb upstream 0.5kb upstream 500 false Chr01: 1249525-1250024 Sorghum bicolor
Sobic.001G013500 0.5kb downstream 0.5kb downstream 3242 true Chr01: 1246283-1249524 Sorghum bicolor
Sobic.001G013500 0.5kb downstream 0.5kb downstream 500 false Chr01: 1246283-1246782 Sorghum bicolor
Sobic.001G013500 1.0kb upstream 1.0kb upstream 3742 true Chr01: 1246783-1250524 Sorghum bicolor
Sobic.001G013500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1249525-1250524 Sorghum bicolor
Sobic.001G013500 1.0kb downstream 1.0kb downstream 3742 true Chr01: 1245783-1249524 Sorghum bicolor
Sobic.001G013500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1245783-1246782 Sorghum bicolor
Sobic.001G013500 2.0kb upstream 2.0kb upstream 4742 true Chr01: 1246783-1251524 Sorghum bicolor
Sobic.001G013500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1249525-1251524 Sorghum bicolor
Sobic.001G013500 2.0kb downstream 2.0kb downstream 4742 true Chr01: 1244783-1249524 Sorghum bicolor
Sobic.001G013500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1244783-1246782 Sorghum bicolor
Sobic.001G013500 5.0kb upstream 5.0kb upstream 7742 true Chr01: 1246783-1254524 Sorghum bicolor
Sobic.001G013500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1249525-1254524 Sorghum bicolor
Sobic.001G013500 5.0kb downstream 5.0kb downstream 7742 true Chr01: 1241783-1249524 Sorghum bicolor
Sobic.001G013500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1241783-1246782 Sorghum bicolor
Sobic.001G013500 10.0kb upstream 10.0kb upstream 12742 true Chr01: 1246783-1259524 Sorghum bicolor
Sobic.001G013500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1249525-1259524 Sorghum bicolor
Sobic.001G013500 10.0kb downstream 10.0kb downstream 12742 true Chr01: 1236783-1249524 Sorghum bicolor
Sobic.001G013500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1236783-1246782 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194705 5267 Panicoideae View MSA
124572800 5269 Grass View MSA
122051264 5273 Angiosperm View MSA
121346486 5274 Embryophyte View MSA
123424696 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.768     High  
cufflinks 35.14     High High
cufflinks 13.791     High Low
cufflinks 26.626     High  
cufflinks 13.433     High Low
cufflinks 21.12     High  
cufflinks 30.669     High High
cufflinks 30.95     High High
cufflinks 17.296     High  
cufflinks 23.422     High  
cufflinks 31.43     High High
cufflinks 12.337     High Low
cufflinks 15.782     High  
cufflinks 20.66     High  
cufflinks 19.422     High  
cufflinks 20.401     High  
cufflinks 33.921     High High
cufflinks 30.076     High  
cufflinks 14.294     High Low
cufflinks 12.604     High Low
cufflinks 27.478     High  
cufflinks 18.624     High  
cufflinks 25.094     High  
cufflinks 24.072     High  
cufflinks 29.602     High  
cufflinks 34.27     High High
cufflinks 18.391     High  
cufflinks 44.019     High High
cufflinks 25.493     High  
cufflinks 18.59     High  

0 Strain