Gene : Sobic.001G012900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12961 - CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 Genomic Order:  127
Name:  ? Sobic.001G012900 Secondary Identifier:  ? PAC:37940877
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G012900 0.5kb upstream 0.5kb upstream 10552 true Chr01: 1210647-1221198 Sorghum bicolor
Sobic.001G012900 0.5kb upstream 0.5kb upstream 500 false Chr01: 1210647-1211146 Sorghum bicolor
Sobic.001G012900 0.5kb downstream 0.5kb downstream 10552 true Chr01: 1211147-1221698 Sorghum bicolor
Sobic.001G012900 0.5kb downstream 0.5kb downstream 500 false Chr01: 1221199-1221698 Sorghum bicolor
Sobic.001G012900 1.0kb upstream 1.0kb upstream 11052 true Chr01: 1210147-1221198 Sorghum bicolor
Sobic.001G012900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1210147-1211146 Sorghum bicolor
Sobic.001G012900 1.0kb downstream 1.0kb downstream 11052 true Chr01: 1211147-1222198 Sorghum bicolor
Sobic.001G012900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1221199-1222198 Sorghum bicolor
Sobic.001G012900 2.0kb upstream 2.0kb upstream 12052 true Chr01: 1209147-1221198 Sorghum bicolor
Sobic.001G012900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1209147-1211146 Sorghum bicolor
Sobic.001G012900 2.0kb downstream 2.0kb downstream 12052 true Chr01: 1211147-1223198 Sorghum bicolor
Sobic.001G012900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1221199-1223198 Sorghum bicolor
Sobic.001G012900 5.0kb upstream 5.0kb upstream 15052 true Chr01: 1206147-1221198 Sorghum bicolor
Sobic.001G012900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1206147-1211146 Sorghum bicolor
Sobic.001G012900 5.0kb downstream 5.0kb downstream 15052 true Chr01: 1211147-1226198 Sorghum bicolor
Sobic.001G012900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1221199-1226198 Sorghum bicolor
Sobic.001G012900 10.0kb upstream 10.0kb upstream 20052 true Chr01: 1201147-1221198 Sorghum bicolor
Sobic.001G012900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1201147-1211146 Sorghum bicolor
Sobic.001G012900 10.0kb downstream 10.0kb downstream 20052 true Chr01: 1211147-1231198 Sorghum bicolor
Sobic.001G012900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1221199-1231198 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184018 5267 Panicoideae View MSA
124569829 5269 Grass View MSA
122042143 5273 Angiosperm View MSA
121348897 5274 Embryophyte View MSA
123428033 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.793        
cufflinks 0.463       Low
cufflinks 1.053       Low
cufflinks 1.817        
cufflinks 4.291        
cufflinks 1.877        
cufflinks 3.338        
cufflinks 1.473        
cufflinks 3.404        
cufflinks 3.214        
cufflinks 4.433        
cufflinks 5.308        
cufflinks 4.085        
cufflinks 5.077        
cufflinks 3.081        
cufflinks 1.626        
cufflinks 3.926        
cufflinks 3.919        
cufflinks 1.271       Low
cufflinks 4.47        
cufflinks 3.766        
cufflinks 5.913        
cufflinks 5.964        
cufflinks 5.846        
cufflinks 0.924       Low
cufflinks 0.423       Low
cufflinks 3.481        
cufflinks 0.995       Low
cufflinks 4.018        
cufflinks 3.167        

0 Strain