Gene : Sobic.001G014500 S. bicolor v3.1.1
Defline:  (1 of 3) K03016 - DNA-directed RNA polymerases I, II, and III subunit RPABC3 (RPB8, POLR2H) Genomic Order:  143
Name:  ? Sobic.001G014500 Secondary Identifier:  ? PAC:37941411
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G014500 0.5kb upstream 0.5kb upstream 3619 true Chr01: 1316218-1319836 Sorghum bicolor
Sobic.001G014500 0.5kb upstream 0.5kb upstream 500 false Chr01: 1316218-1316717 Sorghum bicolor
Sobic.001G014500 0.5kb downstream 0.5kb downstream 3619 true Chr01: 1316718-1320336 Sorghum bicolor
Sobic.001G014500 0.5kb downstream 0.5kb downstream 500 false Chr01: 1319837-1320336 Sorghum bicolor
Sobic.001G014500 1.0kb upstream 1.0kb upstream 4119 true Chr01: 1315718-1319836 Sorghum bicolor
Sobic.001G014500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1315718-1316717 Sorghum bicolor
Sobic.001G014500 1.0kb downstream 1.0kb downstream 4119 true Chr01: 1316718-1320836 Sorghum bicolor
Sobic.001G014500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1319837-1320836 Sorghum bicolor
Sobic.001G014500 2.0kb upstream 2.0kb upstream 5119 true Chr01: 1314718-1319836 Sorghum bicolor
Sobic.001G014500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1314718-1316717 Sorghum bicolor
Sobic.001G014500 2.0kb downstream 2.0kb downstream 5119 true Chr01: 1316718-1321836 Sorghum bicolor
Sobic.001G014500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1319837-1321836 Sorghum bicolor
Sobic.001G014500 5.0kb upstream 5.0kb upstream 8119 true Chr01: 1311718-1319836 Sorghum bicolor
Sobic.001G014500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1311718-1316717 Sorghum bicolor
Sobic.001G014500 5.0kb downstream 5.0kb downstream 8119 true Chr01: 1316718-1324836 Sorghum bicolor
Sobic.001G014500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1319837-1324836 Sorghum bicolor
Sobic.001G014500 10.0kb upstream 10.0kb upstream 13119 true Chr01: 1306718-1319836 Sorghum bicolor
Sobic.001G014500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1306718-1316717 Sorghum bicolor
Sobic.001G014500 10.0kb downstream 10.0kb downstream 13119 true Chr01: 1316718-1329836 Sorghum bicolor
Sobic.001G014500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1319837-1329836 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194705 5267 Panicoideae View MSA
124572800 5269 Grass View MSA
122051264 5273 Angiosperm View MSA
121346486 5274 Embryophyte View MSA
123424696 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.248     High High
cufflinks 1.254       Low
cufflinks 2.882        
cufflinks 4.853        
cufflinks 4.478        
cufflinks 5.172       High
cufflinks 2.516        
cufflinks 2.031       Low
cufflinks 4.133        
cufflinks 4.751        
cufflinks 3.312        
cufflinks 2.498        
cufflinks 3.86        
cufflinks 2.923        
cufflinks 3.897        
cufflinks 2.1       Low
cufflinks 2.549        
cufflinks 3.106        
cufflinks 1.625       Low
cufflinks 2.693        
cufflinks 6.063       High
cufflinks 3.511        
cufflinks 3.021        
cufflinks 3.126        
cufflinks 1.205       Low
cufflinks 1.297       Low
cufflinks 3.602        
cufflinks 6.003       High
cufflinks 2.808        
cufflinks 4.993        

0 Strain