Gene : Sobic.001G010500 S. bicolor v3.1.1
Defline:  (1 of 9) PF07899 - Frigida-like protein (Frigida) Genomic Order:  105
Name:  ? Sobic.001G010500 Secondary Identifier:  ? PAC:37940043
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G010500 0.5kb upstream 0.5kb upstream 3395 true Chr01: 930875-934269 Sorghum bicolor
Sobic.001G010500 0.5kb upstream 0.5kb upstream 500 false Chr01: 933770-934269 Sorghum bicolor
Sobic.001G010500 0.5kb downstream 0.5kb downstream 3395 true Chr01: 930375-933769 Sorghum bicolor
Sobic.001G010500 0.5kb downstream 0.5kb downstream 500 false Chr01: 930375-930874 Sorghum bicolor
Sobic.001G010500 1.0kb upstream 1.0kb upstream 3895 true Chr01: 930875-934769 Sorghum bicolor
Sobic.001G010500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 933770-934769 Sorghum bicolor
Sobic.001G010500 1.0kb downstream 1.0kb downstream 3895 true Chr01: 929875-933769 Sorghum bicolor
Sobic.001G010500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 929875-930874 Sorghum bicolor
Sobic.001G010500 2.0kb upstream 2.0kb upstream 4895 true Chr01: 930875-935769 Sorghum bicolor
Sobic.001G010500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 933770-935769 Sorghum bicolor
Sobic.001G010500 2.0kb downstream 2.0kb downstream 4895 true Chr01: 928875-933769 Sorghum bicolor
Sobic.001G010500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 928875-930874 Sorghum bicolor
Sobic.001G010500 5.0kb upstream 5.0kb upstream 7895 true Chr01: 930875-938769 Sorghum bicolor
Sobic.001G010500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 933770-938769 Sorghum bicolor
Sobic.001G010500 5.0kb downstream 5.0kb downstream 7895 true Chr01: 925875-933769 Sorghum bicolor
Sobic.001G010500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 925875-930874 Sorghum bicolor
Sobic.001G010500 10.0kb upstream 10.0kb upstream 12895 true Chr01: 930875-943769 Sorghum bicolor
Sobic.001G010500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 933770-943769 Sorghum bicolor
Sobic.001G010500 10.0kb downstream 10.0kb downstream 12895 true Chr01: 920875-933769 Sorghum bicolor
Sobic.001G010500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 920875-930874 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176182 5267 Panicoideae View MSA
124586684 5269 Grass View MSA
122043307 5273 Angiosperm View MSA
121310105 5274 Embryophyte View MSA
123347687 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.186        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.348       High
cufflinks 0.114        
cufflinks 0.178        
cufflinks 0.026     Low  
cufflinks 0.031     Low  
cufflinks 0.095        
cufflinks 0.026     Low  
cufflinks 0.029     Low  
cufflinks 0.15        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.547       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.14        
cufflinks 0.16        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.206        
cufflinks 1.003       High
cufflinks 0.016     Low  
cufflinks 0.031     Low  
cufflinks 0.062     Low  
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 1.073       High
cufflinks 0.034     Low  
cufflinks 0.471       High

0 Strain