Gene : Sobic.003G386300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR30560//PTHR30560:SF2 - TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE // SUBFAMILY NOT NAMED Genomic Order:  4062
Name:  ? Sobic.003G386300 Secondary Identifier:  ? PAC:37914642
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G386300 0.5kb upstream 0.5kb upstream 2257 true Chr03: 69857679-69859935 Sorghum bicolor
Sobic.003G386300 0.5kb upstream 0.5kb upstream 500 false Chr03: 69859436-69859935 Sorghum bicolor
Sobic.003G386300 0.5kb downstream 0.5kb downstream 2257 true Chr03: 69857179-69859435 Sorghum bicolor
Sobic.003G386300 0.5kb downstream 0.5kb downstream 500 false Chr03: 69857179-69857678 Sorghum bicolor
Sobic.003G386300 1.0kb upstream 1.0kb upstream 2757 true Chr03: 69857679-69860435 Sorghum bicolor
Sobic.003G386300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 69859436-69860435 Sorghum bicolor
Sobic.003G386300 1.0kb downstream 1.0kb downstream 2757 true Chr03: 69856679-69859435 Sorghum bicolor
Sobic.003G386300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 69856679-69857678 Sorghum bicolor
Sobic.003G386300 2.0kb upstream 2.0kb upstream 3757 true Chr03: 69857679-69861435 Sorghum bicolor
Sobic.003G386300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 69859436-69861435 Sorghum bicolor
Sobic.003G386300 2.0kb downstream 2.0kb downstream 3757 true Chr03: 69855679-69859435 Sorghum bicolor
Sobic.003G386300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 69855679-69857678 Sorghum bicolor
Sobic.003G386300 5.0kb upstream 5.0kb upstream 6757 true Chr03: 69857679-69864435 Sorghum bicolor
Sobic.003G386300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 69859436-69864435 Sorghum bicolor
Sobic.003G386300 5.0kb downstream 5.0kb downstream 6757 true Chr03: 69852679-69859435 Sorghum bicolor
Sobic.003G386300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 69852679-69857678 Sorghum bicolor
Sobic.003G386300 10.0kb upstream 10.0kb upstream 11757 true Chr03: 69857679-69869435 Sorghum bicolor
Sobic.003G386300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 69859436-69869435 Sorghum bicolor
Sobic.003G386300 10.0kb downstream 10.0kb downstream 11757 true Chr03: 69847679-69859435 Sorghum bicolor
Sobic.003G386300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 69847679-69857678 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184124 5267 Panicoideae View MSA
124580279 5269 Grass View MSA
122048682 5273 Angiosperm View MSA
121348209 5274 Embryophyte View MSA
123380773 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.065     Low Low
cufflinks 57.226     High High
cufflinks 31.309     High High
cufflinks 11.291        
cufflinks 1.273        
cufflinks 14.544     High  
cufflinks 25.568     High High
cufflinks 59.333     High High
cufflinks 0.968        
cufflinks 0.574        
cufflinks 0.564        
cufflinks 0.487       Low
cufflinks 0.985        
cufflinks 1.102        
cufflinks 9.143        
cufflinks 41.02     High High
cufflinks 25.009     High High
cufflinks 37.548     High High
cufflinks 20.978     High  
cufflinks 13.343     High  
cufflinks 1.603        
cufflinks 1.331        
cufflinks 0.423       Low
cufflinks 0.489       Low
cufflinks 20.561     High  
cufflinks 44.007     High High
cufflinks 0.279       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 60.714     High High
cufflinks 7.343        

0 Strain